RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 LINC00346Q8IVM7 164 aa17.05■□□□□ 0.32
SHANK3-203ENST00000445220 PFN4Q8NHR9 129 aa17.05■□□□□ 0.32
SHANK3-203ENST00000445220 Q96M85 177 aa17.05■□□□□ 0.32
SHANK3-203ENST00000445220 ZC3H12DA2A288 527 aaKnown RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 C2orf72A6NCS6 295 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 SIGLEC6O43699 453 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 SPP1P10451 314 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 RAB38P57729 211 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 FABP9Q0Z7S8 132 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 ARSJQ5FYB0 599 aaPredicted RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 OLIG3Q7RTU3 272 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 MMP21Q8N119 569 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 ZNF485Q8NCK3 441 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 RXFP4Q8TDU9 374 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 TOE1Q96GM8 510 aaKnown RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 PTPRZ1P23471 2315 aaPredicted RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 NTF3P20783 257 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 EEF1A1P68104 462 aaKnown RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 OR4C5Q8NGB2 326 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 CD63P08962 238 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 GCH1P30793 250 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 IQCJQ1A5X6 159 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 LINC00303Q3SY05 128 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 ZNF574Q6ZN55 896 aaPredicted RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 ZNF595Q8IYB9 648 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 OR4A16Q8NH70 328 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 EMG1Q92979 244 aaKnown RBP17.04■□□□□ 0.32
SHANK3-203ENST00000445220 REEP6Q96HR9 211 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 KCNG2Q9UJ96 466 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 FABP4P15090 132 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 SOX18P35713 384 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 HTR5AP47898 357 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 MZT1Q08AG7 82 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 CDK5R1Q15078 307 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 RAB35Q15286 201 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 SMUG1Q53HV7 270 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 LCN15Q6UWW0 184 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 TMEM64Q6YI46 380 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 OR52B4Q8NGK2 314 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 SMIM7Q9BQ49 75 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 WWTR1Q9GZV5 400 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 SLC35D1Q9NTN3 355 aa17.04■□□□□ 0.32
SHANK3-203ENST00000445220 A0A0B4J203 849 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 A8MVM7 634 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 KLKB1P03952 638 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 HNRNPA3P51991 378 aaKnown RBP17.03■□□□□ 0.32
SHANK3-203ENST00000445220 HLXQ14774 488 aaPredicted RBP17.03■□□□□ 0.32
SHANK3-203ENST00000445220 FXNQ16595 210 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 C11orf87Q6NUJ2 197 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 ADAMTSL4Q6UY14 1074 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 TAS2R4Q9NYW5 299 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 AKR1C3P42330 323 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 FAM78AQ5JUQ0 283 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 SLC16A12Q6ZSM3 486 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 ZFP62Q8NB50 900 aaPredicted RBP17.03■□□□□ 0.32
SHANK3-203ENST00000445220 OR4C16Q8NGL9 310 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 SCMH1Q96GD3 660 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 INSM2Q96T92 566 aaPredicted RBP17.03■□□□□ 0.32
SHANK3-203ENST00000445220 ENKD1Q9H0I2 346 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 AKAP11Q9UKA4 1901 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 P2RX1P51575 399 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 OR8G2PQ6IF36 304 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 VRK3Q8IV63 474 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 HSD17B8Q92506 261 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 FAM103A1Q9BTL3 118 aaKnown RBP17.03■□□□□ 0.32
SHANK3-203ENST00000445220 MMP26Q9NRE1 261 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 TUSC2O75896 110 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 SLC16A11Q8NCK7 471 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 PLEKHF2Q9H8W4 249 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 TNFRSF12AQ9NP84 129 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 LRP5O75197 1615 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 ITGB4P16144 1822 aa17.03■□□□□ 0.32
SHANK3-203ENST00000445220 NXPH3O95157 252 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 SLC2A10O95528 541 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 DIO1P49895 249 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 PTCRAQ6ISU1 281 aaPredicted RBP17.02■□□□□ 0.32
SHANK3-203ENST00000445220 SLC22A12Q96S37 553 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 HDAC8Q9BY41 377 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 P2RY12Q9H244 342 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 SLCO2B1O94956 709 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 EPXP11678 715 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 RPL34P49207 117 aaKnown RBP17.02■□□□□ 0.32
SHANK3-203ENST00000445220 HSD17B13Q7Z5P4 300 aaPredicted RBP17.02■□□□□ 0.32
SHANK3-203ENST00000445220 LRRTM1Q86UE6 522 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 TCTN2Q96GX1 697 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 ST6GAL2Q96JF0 529 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 DUSP23Q9BVJ7 150 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 ACAD8Q9UKU7 415 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 LAMP3Q9UQV4 416 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 TRAV1-2A0A0B4J238 106 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 GPR31O00270 319 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 TSPAN12O95859 305 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 GABREP78334 506 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 PJVKQ0ZLH3 352 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 NCR3LG1Q68D85 454 aa17.02■□□□□ 0.32
SHANK3-203ENST00000445220 FCRL6Q6DN72 434 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms