RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FAM221AA4D161 298 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 SNTNA6NMZ2 147 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 C12orf71A8MTZ7 269 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 ZNF593O00488 134 aaPredicted RBP15.01□□□□□ -0.01
LIME1-202ENST00000444951 CST2P09228 141 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 KIR2DL3P43628 341 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 ENTPD1P49961 510 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 HCCSP53701 268 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 ZNF91Q05481 1191 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 PPA1Q15181 289 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 TAB1Q15750 504 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 KCNMB1Q16558 191 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 SLC36A2Q495M3 483 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 TIMM23BQ5SRD1 257 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 C22orf34Q6ZV56 151 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 MDP1Q86V88 176 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 C17orf78Q8N4C9 275 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 BPIFB6Q8NFQ5 453 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 OR2AJ1Q8NGZ0 328 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 NANOS1Q8WY41 292 aaKnown RBP15.01□□□□□ -0.01
LIME1-202ENST00000444951 RNFT2Q96EX2 444 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 CNN2Q99439 309 aaKnown RBP15.01□□□□□ -0.01
LIME1-202ENST00000444951 NOX3Q9HBY0 568 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 ZNF224Q9NZL3 707 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 NDRG3Q9UGV2 375 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.01□□□□□ -0.01
LIME1-202ENST00000444951 AMDHD2Q9Y303 409 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 PCDHGB5Q9Y5G0 923 aa15.01□□□□□ -0.01
LIME1-202ENST00000444951 TUBAL3A6NHL2 446 aa15□□□□□ -0.01
LIME1-202ENST00000444951 WNT11O96014 354 aa15□□□□□ -0.01
LIME1-202ENST00000444951 PSKH1P11801 424 aa15□□□□□ -0.01
LIME1-202ENST00000444951 ZNF32P17041 273 aa15□□□□□ -0.01
LIME1-202ENST00000444951 MTNR1AP48039 350 aa15□□□□□ -0.01
LIME1-202ENST00000444951 ZNF83P51522 516 aa15□□□□□ -0.01
LIME1-202ENST00000444951 LSM6P62312 80 aaKnown RBP15□□□□□ -0.01
LIME1-202ENST00000444951 RAB1AP62820 205 aa15□□□□□ -0.01
LIME1-202ENST00000444951 NRN1LQ496H8 165 aa15□□□□□ -0.01
LIME1-202ENST00000444951 TMEM53Q6P2H8 277 aa15□□□□□ -0.01
LIME1-202ENST00000444951 DPY19L4Q7Z388 723 aa15□□□□□ -0.01
LIME1-202ENST00000444951 TIGD4Q8IY51 512 aa15□□□□□ -0.01
LIME1-202ENST00000444951 HSD17B8Q92506 261 aa15□□□□□ -0.01
LIME1-202ENST00000444951 TBX5Q99593 518 aa15□□□□□ -0.01
LIME1-202ENST00000444951 TTTY10Q9BZA0 68 aa15□□□□□ -0.01
LIME1-202ENST00000444951 CXXC4Q9H2H0 198 aa15□□□□□ -0.01
LIME1-202ENST00000444951 SLC24A3Q9HC58 644 aa15□□□□□ -0.01
LIME1-202ENST00000444951 LHFPL6Q9Y693 200 aa15□□□□□ -0.01
LIME1-202ENST00000444951 XPNPEP2O43895 674 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 FAM20BO75063 409 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 UBL3O95164 117 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 RAB36O95755 333 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 HRGP04196 525 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 DBTP11182 482 aaKnown RBP14.99□□□□□ -0.01
LIME1-202ENST00000444951 PCBD1P61457 104 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 SORDQ00796 357 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 AQP6Q13520 282 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 EIF2B1Q14232 305 aaKnown RBP14.99□□□□□ -0.01
LIME1-202ENST00000444951 GSG1Q2KHT4 349 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 LAIR2Q6ISS4 152 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 SPATC1Q76KD6 591 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 SLC16A9Q7RTY1 509 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 P2RY8Q86VZ1 359 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 OR4F15Q8NGB8 312 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 AKR7LQ8NHP1 331 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 TMUB1Q9BVT8 246 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 CLEC4MQ9H2X3 399 aaPredicted RBP14.99□□□□□ -0.01
LIME1-202ENST00000444951 ADGRL4Q9HBW9 690 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 ST6GALNAC2Q9UJ37 374 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 KCNG2Q9UJ96 466 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 PLEKHA6Q9Y2H5 1048 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 RPL36Q9Y3U8 105 aaKnown RBP14.99□□□□□ -0.01
LIME1-202ENST00000444951 SLC25A15Q9Y619 301 aa14.99□□□□□ -0.01
LIME1-202ENST00000444951 ARPC4-TTLL3A0A0A6YYG9 625 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 A6NNC1 897 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 M0R1B8 84 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 RER1O15258 196 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 DENRO43583 198 aaKnown RBP14.98□□□□□ -0.01
LIME1-202ENST00000444951 TMCC2O75069 709 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 THBDP07204 575 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 SBK2P0C263 348 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 HOXB1P14653 301 aaPredicted RBP14.98□□□□□ -0.01
LIME1-202ENST00000444951 PPP3CBP16298 524 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 ARR3P36575 388 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 IDH3GP51553 393 aaPredicted RBP14.98□□□□□ -0.01
LIME1-202ENST00000444951 GGTLC2Q14390 218 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 RAB39AQ14964 217 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 PABPC1L2AQ5JQF8 200 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 C6orf141Q5SZD1 244 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 SLC18B1Q6NT16 456 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 ZNF774Q6NX45 483 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 DCXRQ7Z4W1 244 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 CDC20BQ86Y33 519 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 SLC35F2Q8IXU6 374 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 CCDC36Q8IYA8 594 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 ZNF786Q8N393 782 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 OR10H4Q8NGA5 316 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 FBLIM1Q8WUP2 373 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 THEM6Q8WUY1 208 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 LGALS12Q96DT0 336 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 FOXC2Q99958 501 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 RHNO1Q9BSD3 238 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 1207.4 ms