RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TPGS2Q68CL5 300 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 MFSD9Q8NBP5 474 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 SIRT7Q9NRC8 400 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 GRHPRQ9UBQ7 328 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 PPIL1Q9Y3C6 166 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 TRBV5-7A0A0A0MS05 114 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 SCGNO76038 276 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 HEXBP07686 556 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 QDPRP09417 244 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 ZNF407Q9C0G0 2248 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 CLEC4EQ9ULY5 219 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 LHX6Q9UPM6 363 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 STRAPQ9Y3F4 350 aaKnown RBP4.56□□□□□ -1.68
HERC1-201ENST00000443617 ZNF20P17024 532 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 ACKR3P25106 362 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 ACY1Q03154 408 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 UBE2V2Q15819 145 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 FAM185AQ8N0U4 392 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 CLEC1AQ8NC01 280 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 OR5B2Q96R09 309 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 UBQLN4Q9NRR5 601 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 PISDQ9UG56 409 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 MRM2Q9UI43 246 aaKnown RBP4.56□□□□□ -1.68
HERC1-201ENST00000443617 KCNG2Q9UJ96 466 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 INTS1Q8N201 2190 aaKnown RBP4.56□□□□□ -1.68
HERC1-201ENST00000443617 ADAP1O75689 374 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 FGF7P21781 194 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 MPZP25189 248 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 SULT1A1P50225 295 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 ZNF385CQ66K41 422 aaPredicted RBP4.56□□□□□ -1.68
HERC1-201ENST00000443617 OPN5Q6U736 354 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 SGPP2Q8IWX5 399 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 BRI3BPQ8WY22 251 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 HAS2Q92819 552 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 RNF181Q9P0P0 153 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 HS3ST2Q9Y278 367 aa4.56□□□□□ -1.68
HERC1-201ENST00000443617 TRBV5-5A0A0J9YX44 114 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 A0A1W2PPE2 198 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 LEFTY2O00292 366 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NID1P14543 1247 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 S1PR1P21453 382 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ZBTB25P24278 435 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GNMTQ14749 295 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TMPRSS11FQ6ZWK6 438 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TAS1R1Q7RTX1 841 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 MRPL41Q8IXM3 137 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 RFLNBQ8N5W9 214 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SMARCD2Q92925 531 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RRNAD1Q96FB5 475 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR2M4Q96R27 311 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ST6GALNAC5Q9BVH7 336 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 KCNE5Q9UJ90 142 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 PCP4P48539 62 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 VAMP2P63027 116 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 CDK3Q00526 305 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 FBXO42Q6P3S6 717 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 CMTM8Q8IZV2 173 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 KDF1Q8NAX2 398 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 A0A0A6YYH2 397 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 A6NJ64 397 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RAB27BO00194 218 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 CD160O95971 181 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ITGA5P08648 1049 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR2A2Q6IF42 318 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NRSN2Q9GZP1 204 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NELFAQ9H3P2 528 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GDF2Q9UK05 429 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR4C45A6NMZ5 311 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GLCEO94923 617 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TUBG1P23258 451 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 PPICP45877 212 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GFI1Q99684 422 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ELL3Q9HB65 397 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 ENPP2Q13822 863 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 FAM189A2Q15884 450 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 EXOSC6Q5RKV6 272 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR6N2Q8NGY6 317 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 POM121Q96HA1 1249 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RNF126Q9BV68 326 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RAB18Q9NP72 206 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 DUSP11O75319 330 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 KNG1P01042 644 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GPX4P36969 197 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 RPS15P62841 145 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 ADGRE4PQ86SQ3 457 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 C14orf144Q96I85 54 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RAB33BQ9H082 229 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TCEAL2Q9H3H9 227 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 MYOZ1Q9NP98 299 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 SCAF4O95104 1147 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 SCGB1D2O95969 90 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SRSF4Q08170 494 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 IAH1Q2TAA2 248 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 SMIM8Q96KF7 97 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TAS2R4Q9NYW5 299 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SERTAD3Q9UJW9 196 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms