RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DEPPQ9NTK1 212 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ALG1L2C9J202 215 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 H3BMH7 237 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MPC2O95563 127 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SULT1A3P0DMM9 295 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SULT1A4P0DMN0 295 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 RAG2P55895 527 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 RAC1P63000 192 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 HSF2Q03933 536 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 RUNX1T1Q06455 604 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CAMK2DQ13557 499 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 MFSD13AQ14CX5 517 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 TAF13Q15543 124 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SFXN4Q6P4A7 337 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC22A25Q6T423 547 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 GRINAQ7Z429 371 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC37A3Q8NCC5 494 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR2T33Q8NG76 320 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 PIGXQ8TBF5 258 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 DEDD2Q8WXF8 326 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 RGP1Q92546 391 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 CNOT9Q92600 299 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 RFKQ969G6 155 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 WACQ9BTA9 647 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 UBTD1Q9HAC8 227 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 NANSQ9NR45 359 aa6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 DNAJB12Q9NXW2 375 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A0B4J2E0 115 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1B0GX12 115 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 C16orf97H3BN30 126 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 AQP7O14520 342 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 PIN1P1O15428 100 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ARHGEF9O43307 516 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CH25HO95992 272 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 UCHL1P09936 223 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CLUP10909 449 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CD79AP11912 226 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 POLR2HP52434 150 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 GNG2P59768 71 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 RPS7P62081 194 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 GSG1Q2KHT4 349 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 HACD4Q5VWC8 232 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 WBP2NLQ6ICG8 309 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CXXC5Q7LFL8 322 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 TPRA1Q86W33 373 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 UEVLDQ8IX04 471 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR5J2Q8NH18 312 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ABHD4Q8TB40 342 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF524Q96C55 264 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 MRGPRX4Q96LA9 322 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 HS6ST2Q96MM7 605 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ALG8Q9BVK2 526 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 DYNLRB1Q9NP97 96 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 LIPGQ9Y5X9 500 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 HEATR5AQ86XA9 2040 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 HIVEP3Q5T1R4 2406 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CSPG4Q6UVK1 2322 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 EXPH5Q8NEV8 1989 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 C12orf71A8MTZ7 269 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGKV1D-16P01601 117 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CLPSP04118 112 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 SBK2P0C263 348 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 NID1P14543 1247 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ATF1P18846 271 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 LCN1P31025 176 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGLV3-21P80748 117 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 SIGIRRQ6IA17 410 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 GRPEL2Q8TAA5 225 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 PIK3IP1Q96FE7 263 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC38A2Q96QD8 506 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 RBP7Q96R05 134 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 UCN2Q96RP3 112 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 THAP7Q9BT49 309 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF703Q9H7S9 590 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 EMC7Q9NPA0 242 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 NPDC1Q9NQX5 325 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 H2AFY2Q9P0M6 372 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 MEMO1Q9Y316 297 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 MED31Q9Y3C7 131 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 GTF3C1Q12789 2109 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 BAHCC1Q9P281 2608 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CD37P11049 281 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 PSKH1P11801 424 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 NR2C1P13056 603 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 APOBEC1P41238 236 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR3A3P47888 321 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 RPS4XP62701 263 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CRYZQ08257 329 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CRMP1Q14194 572 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 CDONQ4KMG0 1287 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 GID4Q8IVV7 300 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 LSMEM1Q8N8F7 131 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 Q8NA96 180 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 ST8SIA1Q92185 356 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 SNAPC3Q92966 411 aa6.57□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC25A38Q96DW6 304 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms