RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ATG5Q9H1Y0 275 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 CUL9Q8IWT3 2517 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 TMEM72A0PK05 275 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 CPED1A4D0V7 1026 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 TO15178 435 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 LDB3O75112 727 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 DNAJB6O75190 326 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 FARS2O95363 451 aaKnown RBP10.73□□□□□ -0.69
LTBR-203ENST00000441074 IL2RAP01589 272 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 PRF1P14222 555 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 PGAM2P15259 253 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 HNRNPA2B1P22626 353 aaKnown RBP10.73□□□□□ -0.69
LTBR-203ENST00000441074 PPICP45877 212 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 CAV2P51636 162 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 C1orf61Q13536 156 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 OR7A5Q15622 319 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 TRMT12Q53H54 448 aaKnown RBP10.73□□□□□ -0.69
LTBR-203ENST00000441074 DBX2Q6ZNG2 339 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 BPIFB2Q8N4F0 458 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 ZNF676Q8N7Q3 588 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 OR13C8Q8NGS7 320 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 MITD1Q8WV92 249 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 MCHR2Q969V1 340 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 SLC22A18Q96BI1 424 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 FOXRED1Q96CU9 486 aaPredicted RBP10.73□□□□□ -0.69
LTBR-203ENST00000441074 PTCHD1Q96NR3 888 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 COMMD4Q9H0A8 199 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 SEC61A2Q9H9S3 476 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 RHOFQ9HBH0 211 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 CYTL1Q9NRR1 136 aa10.73□□□□□ -0.69
LTBR-203ENST00000441074 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 TMEM212A6NML5 194 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ZNF736B4DX44 427 aaPredicted RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 SLC17A2O00624 439 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ALOX12BO75342 701 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ITGA5P08648 1049 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 FBP1P09467 338 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SMIM10L1P0DMW3 83 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 MUC1P15941 1255 aaPredicted RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 RCC1P18754 421 aaPredicted RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 AGAP20933 346 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 PSMB6P28072 239 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ACAA2P42765 397 aaKnown RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 SNRPNP63162 240 aaKnown RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 CDNFQ49AH0 187 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 CORO6Q6QEF8 472 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ZNF511Q8NB15 262 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 OR10R2Q8NGX6 335 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 OR2G2Q8NGZ5 317 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 OR10AC1Q8NH08 325 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 TMED6Q8WW62 240 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 HIST1H2BAQ96A08 127 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 RASD2Q96D21 266 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SMIM10Q96HG1 83 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ZNF285Q96NJ3 590 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SELENOIQ9C0D9 397 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 ADAP2Q9NPF8 381 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 GHRLQ9UBU3 117 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 DAPP1Q9UN19 280 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 VSIG4Q9Y279 399 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 KLHDC2Q9Y2U9 406 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 TECTAO75443 2155 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 COL4A2P08572 1712 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 FAM171A2A8MVW0 826 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 EIF1AYO14602 144 aaKnown RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 BRINP1O60477 761 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 CYB5AP00167 134 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 MAP3K8P41279 467 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 EIF1AXP47813 144 aaKnown RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 PPT1P50897 306 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 FABP9Q0Z7S8 132 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 OR4N5Q8IXE1 308 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 NUDCD2Q8WVJ2 157 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 LCN9Q8WX39 176 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 THRSPQ92748 146 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SAT2Q96F10 170 aaPredicted RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 C14orf79Q96F83 325 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SHDQ96IW2 340 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 OR2M4Q96R27 311 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 PHB2Q99623 299 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SLC6A7Q99884 636 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 PAPOLGQ9BWT3 736 aaKnown RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 KCNK15Q9H427 330 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 LYRM4Q9HD34 91 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 MKKSQ9NPJ1 570 aaPredicted RBP10.72□□□□□ -0.69
LTBR-203ENST00000441074 LPAR3Q9UBY5 353 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SLC22A7Q9Y694 548 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 SPACA6W5XKT8 324 aa10.72□□□□□ -0.69
LTBR-203ENST00000441074 A0A1B0GTH9 108 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 C9orf170A2RU37 121 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 TTLL8A6PVC2 850 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 RNASEK-C17orf49H0YIS7 233 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 NDUFS6O75380 124 aaKnown RBP10.71□□□□□ -0.69
LTBR-203ENST00000441074 PDGFBP01127 241 aaPredicted RBP10.71□□□□□ -0.69
LTBR-203ENST00000441074 CRHP06850 196 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 SFTA3P0C7M3 94 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 APEHP13798 732 aaKnown RBP10.71□□□□□ -0.69
LTBR-203ENST00000441074 SLC25A1P53007 311 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms