RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DDX28Q9NUL7 540 aaKnown RBP4.25□□□□□ -1.73
EDEM3-203ENST00000439962 FBXL2Q9UKC9 423 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ING4Q9UNL4 249 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 RBMX2Q9Y388 322 aaKnown RBP4.25□□□□□ -1.73
EDEM3-203ENST00000439962 NPTNQ9Y639 398 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ANKRD17O75179 2603 aaKnown RBP4.25□□□□□ -1.73
EDEM3-203ENST00000439962 F8P00451 2351 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ZANQ9Y493 2812 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 FREM1Q5H8C1 2179 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 CPAMD8Q8IZJ3 1885 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 A0A0A6YYH2 397 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 CENPVL1A0A0U1RR11 272 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 SHISA3A0PJX4 238 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 NKX2-6A6NCS4 301 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 A6NJ64 397 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ELOA3DA6NLF2 546 aaPredicted RBP4.25□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM212A6NML5 194 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 H3BML4 177 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 SCDO00767 359 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF264O43296 627 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ICOSLGO75144 302 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ALX3O95076 343 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ONECUT2O95948 504 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 IGKV3-11P04433 115 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 GKN3PP0CG01 181 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 BMP5P22003 454 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 STOMP27105 288 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 SNTA1Q13424 505 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 GPR176Q14439 515 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 MFSD13AQ14CX5 517 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ELOA3BQ3SY89 546 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 KLHL12Q53G59 568 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 CEP78Q5JTW2 689 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ARL9Q6T311 187 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 IGFL3Q6UXB1 125 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 SPATC1Q76KD6 591 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 MRGPRGQ86SM5 289 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 CDC20BQ86Y33 519 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 CDH26Q8IXH8 852 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM251Q8N6I4 163 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF454Q8N9F8 522 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ELOA3Q8NG57 546 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 OR4M1Q8NGD0 313 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ANGPTL6Q8NI99 470 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF417Q8TAU3 575 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 STK35Q8TDR2 534 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 DUSP19Q8WTR2 217 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 SNX33Q8WV41 574 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 GHSRQ92847 366 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 KLHDC3Q9BQ90 382 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 RTN4RQ9BZR6 473 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 FANCFQ9NPI8 374 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 NANSQ9NR45 359 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 RASD1Q9Y272 281 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 SIRT4Q9Y6E7 314 aaPredicted RBP4.25□□□□□ -1.73
EDEM3-203ENST00000439962 NCKAP5O14513 1909 aa4.25□□□□□ -1.73
EDEM3-203ENST00000439962 A0A0B4J293 547 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 FAM183AA6NL82 134 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 PRSS44E7EML9 344 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 J3QLW9 94 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SULT1C2O00338 296 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SSX4O60224 188 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF254O75437 659 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 RENP00797 406 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 IGKV1D-16P01601 117 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 IL5P05113 134 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 EIF4EP06730 217 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 MELTFP08582 738 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 PSKH1P11801 424 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 CPN1P15169 458 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 HIST1H1CP16403 213 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF19P17023 458 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 AZGP1P25311 298 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 GRNP28799 593 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SHC1P29353 583 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 PTGS2P35354 604 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 PNLIPRP2P54317 469 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 PER3P56645 1201 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 RPS11P62280 158 aaKnown RBP eCLIP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 HOXC5Q00444 222 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 P2RY14Q15391 338 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SLC36A2Q495M3 483 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 Q499Y3 187 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 LINC01590Q5TEZ4 76 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 RAET1LQ5VY80 246 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF57Q68EA5 555 aaPredicted RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OPN5Q6U736 354 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SHFQ7M4L6 423 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 JAZF1Q86VZ6 243 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OR6V1Q8N148 313 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 TOMM5Q8N4H5 51 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 LRRC17Q8N6Y2 441 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SAMD12Q8N8I0 201 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 LSM14AQ8ND56 463 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 MDS2Q8NDY4 140 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OR52E2Q8NGJ4 325 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 MOSPD2Q8NHP6 518 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 CAPSLQ8WWF8 208 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 YIPF5Q969M3 257 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms