RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 IL13RA1P78552 427 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 MFSD9Q8NBP5 474 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 NRIP3Q9NQ35 241 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 DOK5Q9P104 306 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 ZNF337Q9Y3M9 751 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 TVP23AA6NH52 213 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 H0Y8X5 98 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 CD3DP04234 171 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 GPM6BQ13491 265 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 EBPQ15125 230 aaKnown RBP14.35□□□□□ -0.11
DHFR-201ENST00000439211 STEAP1BQ6NZ63 245 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 ARHGAP11AQ6P4F7 1023 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 THSD4Q6ZMP0 1018 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 SEMA6DQ8NFY4 1073 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 TERB2Q8NHR7 220 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 NKD1Q969G9 470 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 JSRP1Q96MG2 331 aaPredicted RBP14.35□□□□□ -0.11
DHFR-201ENST00000439211 ARHGDIGQ99819 225 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 WIF1Q9Y5W5 379 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 SEC14L6B5MCN3 397 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 CYB5AP00167 134 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 FOLR2P14207 255 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 ACKR3P25106 362 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 BARX1Q9HBU1 254 aaPredicted RBP14.34□□□□□ -0.11
DHFR-201ENST00000439211 HRASLS2Q9NWW9 162 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 TNFSF18Q9UNG2 199 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 CSAG2Q9Y5P2 127 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 IFNA6P05013 189 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 FBXO45P0C2W1 286 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 OR13C7P0DN81 318 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 DRD3P35462 400 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 DCDP81605 110 aaKnown RBP14.34□□□□□ -0.11
DHFR-201ENST00000439211 FAM117AQ9C073 453 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 CTDSPLO15194 276 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 ADH1BP00325 375 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 AGAP20933 346 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 CD96P40200 585 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 FRKP42685 505 aaPredicted RBP14.34□□□□□ -0.11
DHFR-201ENST00000439211 LSSP48449 732 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 GUCA2AQ02747 115 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 EIF2B1Q14232 305 aaKnown RBP14.34□□□□□ -0.11
DHFR-201ENST00000439211 HMGN3Q15651 99 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 SLC25A30Q5SVS4 291 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 C1orf189Q5VU69 101 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 OR2T2Q6IF00 324 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 SPNS3Q6ZMD2 512 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 SLC35F3Q8IY50 421 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 INTS14Q96SY0 518 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 MRPL37Q9BZE1 423 aaKnown RBP14.34□□□□□ -0.11
DHFR-201ENST00000439211 PTGES2Q9H7Z7 377 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 CLDND1Q9NY35 253 aa14.34□□□□□ -0.11
DHFR-201ENST00000439211 CEACAM5P06731 702 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 SRMP19623 302 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 CRABP1P29762 137 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 BDH1Q02338 343 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 AGBL4Q5VU57 503 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 CD163Q86VB7 1156 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 METTL27Q8N6F8 245 aaPredicted RBP14.33□□□□□ -0.12
DHFR-201ENST00000439211 CDRT4Q8N9R6 151 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 OR1J2Q8NGS2 313 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 PHB2Q99623 299 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 RAB33BQ9H082 229 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 SRA1Q9HD15 236 aaKnown RBP14.33□□□□□ -0.12
DHFR-201ENST00000439211 MRPS18AQ9NVS2 196 aaKnown RBP14.33□□□□□ -0.12
DHFR-201ENST00000439211 ZNF610Q8N9Z0 462 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 OR1J1Q8NGS3 322 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 IFITM5A6NNB3 132 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 CTSEP14091 401 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 NDUFS1P28331 727 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 SULT1A1P50225 295 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 ACTC1P68032 377 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 ACTA1P68133 377 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 CXADRP78310 365 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 LTBQ06643 244 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 RNF151Q2KHN1 245 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 OR4A4PQ8NGN8 299 aa14.33□□□□□ -0.12
DHFR-201ENST00000439211 CNN2Q99439 309 aaKnown RBP14.33□□□□□ -0.12
DHFR-201ENST00000439211 LRP3O75074 770 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 FGF7P21781 194 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 CAV2P51636 162 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 SERINC2Q96SA4 455 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 SLC6A7Q99884 636 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 C2orf88Q9BSF0 95 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 AICDAQ9GZX7 198 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 METTL8Q9H825 291 aaKnown RBP14.32□□□□□ -0.12
DHFR-201ENST00000439211 THAP10Q9P2Z0 257 aaPredicted RBP14.32□□□□□ -0.12
DHFR-201ENST00000439211 ADAM18Q9Y3Q7 739 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 HOXB2P14652 356 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 NUTF2P61970 127 aaKnown RBP14.32□□□□□ -0.12
DHFR-201ENST00000439211 PRAMEF8Q5VWM4 474 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 PRAMEF7Q5VXH5 474 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 UNQ6494/PRO21346Q6UXR6 183 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 Q6ZRG5 221 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 ZNF227Q86WZ6 799 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 KDM8Q8N371 416 aa14.32□□□□□ -0.12
DHFR-201ENST00000439211 A0A1B0GWA3 101 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms