RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CNOT2Q9NZN8 540 aaKnown RBP10.96□□□□□ -0.66
NEK1-201ENST00000439128 ZNF391Q9UJN7 358 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 MDFIC2A0A1B0GVS7 189 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 SLC22A5O76082 557 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 IL13RA1P78552 427 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 C6orf89Q6UWU4 347 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 FAM109AQ8N4B1 249 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 OR10K1Q8NGX5 313 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 TUBB1Q9H4B7 451 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 FAM60AQ9NP50 221 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 MYH15Q9Y2K3 1946 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 ALG1L2C9J202 215 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 TFPTP0C1Z6 253 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 TAS2R19P59542 299 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 DUSP7Q16829 419 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 BCDIN3DQ7Z5W3 292 aaKnown RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 ANGPTL5Q86XS5 388 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 STK35Q8TDR2 534 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 PIK3IP1Q96FE7 263 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 KIRREL1Q96J84 757 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 S1PR5Q9H228 398 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 PLK3Q9H4B4 646 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 BCO1Q9HAY6 547 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ACER3Q9NUN7 267 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ASIC5Q9NY37 505 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SCN4AP35499 1836 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 A0A0U1RQK1 487 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SPINT1O43278 529 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 MOSPD3O75425 235 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SC5DO75845 299 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 NXPH3O95157 252 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ZIC2O95409 532 aaPredicted RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 GPR12P47775 334 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 CYCSP99999 105 aaKnown RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 PMPCAQ10713 525 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 RTL8BQ17RB0 113 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 UBE2NLQ5JXB2 153 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ELFN2Q5R3F8 820 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 OTPQ5XKR4 325 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 LHFPL2Q6ZUX7 228 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 LRRC56Q8IYG6 542 aaPredicted RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 OR4M1Q8NGD0 313 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 BANF2Q9H503 90 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SLCO1C1Q9NYB5 712 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 TAAR3PQ9P1P4 343 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 CNOT11Q9UKZ1 510 aaKnown RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 CLDN1O95832 211 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 HTR1FP30939 366 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 HAAOP46952 286 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 RTP5Q14D33 572 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SLC36A1Q7Z2H8 476 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 B3GNT8Q7Z7M8 397 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 NOXO1Q8NFA2 376 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 TSSK2Q96PF2 358 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 COL4A5P29400 1685 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 IGHV4-34P06331 123 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ZNF133P52736 654 aaPredicted RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 SMIM21Q3B7S5 101 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 D2HGDHQ8N465 521 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 BPIFB2Q8N4F0 458 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 RAB1CQ92928 201 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 DAZAP1Q96EP5 407 aaKnown RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 PPIL1Q9Y3C6 166 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 PRSS37A4D1T9 235 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SLC2A10O95528 541 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 IL1AP01583 271 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ZNF728P0DKX0 622 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 HIST1H1CP16403 213 aaKnown RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 DAPP51397 102 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 CSRP2Q16527 193 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 EMC4Q5J8M3 183 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ZNF441Q8N8Z8 693 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 LINC01555Q8NAE3 123 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ELMOD3Q96FG2 381 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 TEX37Q96LM6 180 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 OR5B12Q96R08 314 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 S1PR3Q99500 378 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 SMIM3Q9BZL3 60 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 ARL6Q9H0F7 186 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 TXNIPQ9H3M7 391 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 NRIP3Q9NQ35 241 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 HEYLQ9NQ87 328 aaPredicted RBP10.95□□□□□ -0.66
NEK1-201ENST00000439128 FBXO34Q9NWN3 711 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
NEK1-201ENST00000439128 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 SRD5A2P31213 254 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 ARRB2P32121 409 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 PHC1P78364 1004 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 GLYATL3Q5SZD4 288 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 LPCAT3Q6P1A2 487 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 SSX9Q7RTT3 188 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 LRRC3BQ96PB8 259 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 SLC29A1Q99808 456 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 ZNF649Q9BS31 505 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 NLKQ9UBE8 527 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 HPGDSO60760 199 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 NR4A2P43354 598 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms