RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PSG6Q00889 435 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 PMPCAQ10713 525 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 SKP2Q13309 424 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 RNASE10Q5GAN6 216 aaKnown RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 CBLN3Q6UW01 205 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF813Q6ZN06 617 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 TRAPPC6BQ86SZ2 158 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 MISPQ8IVT2 679 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF417Q8TAU3 575 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 PATE1Q8WXA2 126 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF251Q9BRH9 671 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 MFRPQ9BY79 579 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 RCC2Q9P258 522 aaKnown RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 TRBV5-5A0A0J9YX44 114 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 EIF1AYO14602 144 aaKnown RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 AGR2O95994 175 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 KLK3P07288 261 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 NME1P15531 152 aaKnown RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 NPY4RP50391 375 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ACTBP60709 375 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ACTG1P63261 375 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ELAVL3Q14576 367 aaKnown RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ELOCQ15369 112 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 CEBPEQ15744 281 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF77Q15935 545 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ALG10Q5BKT4 473 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ULK3Q6PHR2 472 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 DHRS11Q6UWP2 260 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 DPY19L2P2Q6ZN68 376 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 RNF144BQ7Z419 303 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 SPRED2Q7Z698 418 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 FJX1Q86VR8 437 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 KDM8Q8N371 416 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 PAQR4Q8N4S7 273 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 FAM24BQ8N5W8 94 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 C1orf198Q9H425 327 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 FN3KRPQ9HA64 309 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 TBC1D29Q9UFV1 150 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 PCNX3Q9H6A9 2034 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 WIPF3A6NGB9 483 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 STK17BO94768 372 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 ACRP10323 421 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 CEBPBP17676 345 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 PSMB6P28072 239 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RBM34P42696 430 aaKnown RBP12.05□□□□□ -0.48
ACTN1-204ENST00000438964 DMWDQ09019 674 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 FHL5Q5TD97 284 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 LHX8Q68G74 356 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
ACTN1-204ENST00000438964 UQCC3Q6UW78 93 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 DNM1P46Q6ZS02 220 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 SLC16A9Q7RTY1 509 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 LYG2Q86SG7 212 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 PARGQ86W56 976 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 FRMD1Q8N878 549 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 SLC25A43Q8WUT9 341 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-204ENST00000438964 MAFIPQ8WZ33 124 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 HIST1H2BAQ96A08 127 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 SLC25A36Q96CQ1 311 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 AMDHD2Q9Y303 409 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 H0Y8X5 98 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RNASEK-C17orf49H0YIS7 233 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 YIF1AO95070 293 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 APBB3O95704 486 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 CD74P04233 296 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 IFNA4P05014 189 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 ZBTB25P24278 435 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 HTR2CP28335 458 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 SREBF2Q12772 1141 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 MESTQ5EB52 335 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF615Q8N8J6 731 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RCBTB1Q8NDN9 531 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 GAL3ST3Q96A11 431 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 SLC25A44Q96H78 314 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-204ENST00000438964 PHB2Q99623 299 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 NMNAT2Q9BZQ4 307 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RDH16O75452 317 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 OR8U9P0C7N5 309 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 FAM157CP0CG43 387 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RAB6AP20340 208 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 PPP1CAP62136 330 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 PJVKQ0ZLH3 352 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF345Q14585 488 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 PRICKLE4Q2TBC4 344 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 VWA2Q5GFL6 755 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 GALNTL5Q7Z4T8 443 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 TMIEQ8NEW7 156 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 OR4D6Q8NGJ1 314 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 OR8U1Q8NH10 309 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 KTI12Q96EK9 354 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 CYTL1Q9NRR1 136 aa12.05□□□□□ -0.48
ACTN1-204ENST00000438964 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
ACTN1-204ENST00000438964 RP1P56715 2156 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms