RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MSX1P28360 303 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 HSPB2Q16082 182 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ZNF227Q86WZ6 799 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ASCC1Q8N9N2 400 aaKnown RBP13.05□□□□□ -0.32
RFTN1-203ENST00000432519 OR4K17Q8NGC6 315 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 OR4D10Q8NGI6 311 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 SLC25A28Q96A46 364 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 FAM3DQ96BQ1 224 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 MED28Q9H204 178 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 OR10A4Q9H209 315 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 OR51J1Q9H342 316 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ZNF160Q9HCG1 818 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 IGHV3-15A0A0B4J1V0 119 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 A0A1W2PNV4 684 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 A0A1W2PPL8 197 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 CIB4A0PJX0 185 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 KHDRBS3O75525 346 aaKnown RBP13.05□□□□□ -0.32
RFTN1-203ENST00000432519 C1QBP02746 253 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 PGA4P0DJD7 388 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 PGA3P0DJD8 388 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 VEGFCP49767 419 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 GLYATL3Q5SZD4 288 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 TIGD3Q6B0B8 471 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 RNF144BQ7Z419 303 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 TMEM105Q8N8V8 129 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 RNF133Q8WVZ7 376 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ZC3H10Q96K80 434 aaKnown RBP13.05□□□□□ -0.32
RFTN1-203ENST00000432519 SEC61A2Q9H9S3 476 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ING3Q9NXR8 418 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 CYB5R1Q9UHQ9 305 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ETV7Q9Y603 341 aa13.05□□□□□ -0.32
RFTN1-203ENST00000432519 ANKRD20A5PA0PJZ0 165 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 FAM172BPA6NC97 362 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 CENPBD1B2RD01 187 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 IGFBP3P17936 291 aaPredicted RBP13.04□□□□□ -0.32
RFTN1-203ENST00000432519 MC2RQ01718 297 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 MAB21L1Q13394 359 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 LINC00303Q3SY05 128 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 Q6ZTK2 550 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 UEVLDQ8IX04 471 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 OR11H4Q8NGC9 324 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 SLAMF6Q96DU3 332 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 LHFPL6Q9Y693 200 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 TMEM272A0A1B0GTI8 110 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 NPIPB13A6NJU9 1138 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 NPIPB4C9JG80 1138 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 SLC17A2O00624 439 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 CER1O95813 267 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 SLC2A1P11166 492 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 SLC22A10Q63ZE4 541 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 ANKRD16Q6P6B7 361 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 OR13C3Q8NGS6 347 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 JSRP1Q96MG2 331 aaPredicted RBP13.04□□□□□ -0.32
RFTN1-203ENST00000432519 FAM206AQ9NX38 181 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 ZNF222Q9UK12 451 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 PCDHGA5Q9Y5G8 931 aa13.04□□□□□ -0.32
RFTN1-203ENST00000432519 TTC28Q96AY4 2481 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 PCSK5Q92824 1860 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 GGT3PA6NGU5 568 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 XRCC3O43542 346 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ZP1P60852 638 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 SLC23A3Q6PIS1 610 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 DNM1P34Q6PK57 102 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 DACT3Q96B18 629 aaPredicted RBP13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ZMAT3Q9HA38 289 aaKnown RBP13.03□□□□□ -0.32
RFTN1-203ENST00000432519 SLC39A1Q9NY26 324 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 COL27A1Q8IZC6 1860 aaPredicted RBP13.03□□□□□ -0.32
RFTN1-203ENST00000432519 TRAV18A0A075B6X5 111 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 A0A1W2PRS3 328 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 YKT6O15498 198 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 AQP8O94778 261 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 TTRP02766 147 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 RAB11BQ15907 218 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 DMRTC1Q5HYR2 192 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 PLCZ1Q86YW0 608 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 OR2Y1Q8NGV0 311 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ZFAND1Q8TCF1 268 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 CYYR1Q96J86 154 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ZFP64Q9NPA5 681 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 HHLA2Q9UM44 414 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 NCKAP5O14513 1909 aa13.03□□□□□ -0.32
RFTN1-203ENST00000432519 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.32
RFTN1-203ENST00000432519 ARPC1BO15143 372 aaKnown RBP13.02□□□□□ -0.32
RFTN1-203ENST00000432519 PSMB1P20618 241 aaKnown RBP13.02□□□□□ -0.32
RFTN1-203ENST00000432519 STOMP27105 288 aa13.02□□□□□ -0.32
RFTN1-203ENST00000432519 LAP3P28838 519 aa13.02□□□□□ -0.32
RFTN1-203ENST00000432519 ERP29P30040 261 aaKnown RBP13.02□□□□□ -0.32
RFTN1-203ENST00000432519 RAD52P43351 418 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms