RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MTX3Q5HYI7 312 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
SEC13-210ENST00000428626 SYT9Q86SS6 491 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 RNF113BQ8IZP6 322 aaKnown RBP13.11□□□□□ -0.31
SEC13-210ENST00000428626 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 RASD2Q96D21 266 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
SEC13-210ENST00000428626 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 NMNAT1Q9HAN9 279 aaPredicted RBP13.11□□□□□ -0.31
SEC13-210ENST00000428626 ESM1Q9NQ30 184 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 UBAP1Q9NZ09 502 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 PCDHB10Q9UN67 800 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
SEC13-210ENST00000428626 A0A0G2JMP0 313 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 TEX13CA0A0J9YWL9 993 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 A0A0X1KG70 313 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 ISPDA4D126 451 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 PRSS37A4D1T9 235 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 C12orf71A8MTZ7 269 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 H3BSA7 217 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 DOK2O60496 412 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 ABHD16AO95870 558 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 COX5BP10606 129 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 IFNA8P32881 189 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 RPL4P36578 427 aaKnown RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 LIMS1P48059 325 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 SEC61A1P61619 476 aaKnown RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 TNFAIP6P98066 277 aaPredicted RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 USP43Q70EL4 1123 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 ARPINQ7Z6K5 226 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 PEG10Q86TG7 708 aaKnown RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 OR4M2Q8NGB6 313 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 DCLRE1CQ96SD1 692 aaKnown RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 ELOVL3Q9HB03 270 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 MMP26Q9NRE1 261 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 TBCCD1Q9NVR7 557 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 PURGQ9UJV8 347 aaKnown RBP13.1□□□□□ -0.31
SEC13-210ENST00000428626 ZDHHC8Q9ULC8 765 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
SEC13-210ENST00000428626 MGAM2Q2M2H8 2515 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 J3QLI3 93 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 SGCEO43556 437 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 TIMM8AO60220 97 aaPredicted RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 GPANK1O95872 356 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 DBHP09172 617 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 LIPAP38571 399 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 GUCA1AP43080 201 aaPredicted RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 HTR5AP47898 357 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 SEC23BQ15437 767 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 CCDC92Q53HC0 331 aaPredicted RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 UNQ6126/PRO20091Q6UXV3 157 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 PTCHD4Q6ZW05 846 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 FKBP9P1Q75LS8 142 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 C1orf174Q8IYL3 243 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 FAM86B1Q8N7N1 296 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 ZDHHC22Q8N966 263 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 C22orf15Q8WYQ4 148 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 ZNF570Q96NI8 536 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 SIGLEC11Q96RL6 698 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 GPA33Q99795 319 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 PLA2G12AQ9BZM1 189 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 EGLN1Q9GZT9 426 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 SYT4Q9H2B2 425 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 NRIP3Q9NQ35 241 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 TMEM106BQ9NUM4 274 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 GRHPRQ9UBQ7 328 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 CGGBP1Q9UFW8 167 aaPredicted RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 NDRG4Q9ULP0 352 aaKnown RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 COA3Q9Y2R0 106 aaPredicted RBP13.09□□□□□ -0.31
SEC13-210ENST00000428626 NPTNQ9Y639 398 aa13.09□□□□□ -0.31
SEC13-210ENST00000428626 TRBV4-1A0A0J9YWV2 114 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 OR6C6A6NF89 314 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 TRAPPC2LH3BP13 241 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 DCTN6O00399 190 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 GSTA4O15217 222 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 SLC16A7O60669 478 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 DIRAS1O95057 198 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 SBK2P0C263 348 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 KITLGP21583 273 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 OMPP47874 163 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 COMPP49747 757 aaPredicted RBP13.08□□□□□ -0.32
SEC13-210ENST00000428626 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 SCRN3Q0VDG4 424 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 KRR1Q13601 381 aaKnown RBP13.08□□□□□ -0.32
SEC13-210ENST00000428626 TUSC1Q2TAM9 212 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 C1orf94Q6P1W5 598 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms