RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 UNQ6126/PRO20091Q6UXV3 157 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 RINLQ6ZS11 566 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 PTCHD4Q6ZW05 846 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 SYT9Q86SS6 491 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 TMEM158Q8WZ71 300 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 C4orf45Q96LM5 186 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 GPX7Q96SL4 187 aaPredicted RBP15.67■□□□□ 0.1
PSPC1-202ENST00000427943 FUZQ9BT04 418 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 SAP30LQ9HAJ7 183 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 DECR2Q9NUI1 292 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 TAGLN3Q9UI15 199 aa15.67■□□□□ 0.1
PSPC1-202ENST00000427943 TMEFF2Q9UIK5 374 aaPredicted RBP15.67■□□□□ 0.1
PSPC1-202ENST00000427943 NDRG4Q9ULP0 352 aaKnown RBP15.67■□□□□ 0.1
PSPC1-202ENST00000427943 COA3Q9Y2R0 106 aaPredicted RBP15.67■□□□□ 0.1
PSPC1-202ENST00000427943 DYSFO75923 2080 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 PLSCR5A0PG75 271 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 ZSCAN5BA6NJL1 495 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 B4DSR2 109 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 SGCEO43556 437 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 AHCYL1O43865 530 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 ICMTO60725 284 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 GADD45GO95257 159 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 MPZL1O95297 269 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 PPP1R3DO95685 299 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 ABHD16AO95870 558 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 IGHV1-46P01743 117 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 ITGA2P17301 1181 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 CRYBB2P43320 205 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 DVL1P1P54792 670 aaPredicted RBP15.66■□□□□ 0.1
PSPC1-202ENST00000427943 SCRN3Q0VDG4 424 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 SAMD4BQ5PRF9 694 aaKnown RBP15.66■□□□□ 0.1
PSPC1-202ENST00000427943 MBNL2Q5VZF2 373 aaKnown RBP15.66■□□□□ 0.1
PSPC1-202ENST00000427943 FANK1Q8TC84 345 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 NSMCE2Q96MF7 247 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 CDRT15Q96T59 188 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 POFUT1Q9H488 388 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 ELOVL3Q9HB03 270 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 CD300AQ9UGN4 299 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 ARL2BPQ9Y2Y0 163 aa15.66■□□□□ 0.1
PSPC1-202ENST00000427943 KHDRBS3O75525 346 aaKnown RBP15.65■□□□□ 0.1
PSPC1-202ENST00000427943 GPANK1O95872 356 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 TFP02787 698 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 GAAP10253 952 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 CDKN2AP42771 156 aaKnown RBP15.65■□□□□ 0.1
PSPC1-202ENST00000427943 RPS6KA3P51812 740 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 ARHGDIAP52565 204 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 MXRA7P84157 204 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 DBPQ10586 325 aaPredicted RBP15.65■□□□□ 0.1
PSPC1-202ENST00000427943 AQP6Q13520 282 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 SMARCD3Q6STE5 483 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 DPY19L2P2Q6ZN68 376 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 VASH1Q7L8A9 365 aaPredicted RBP15.65■□□□□ 0.1
PSPC1-202ENST00000427943 ADCK1Q86TW2 530 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 GLCCI1Q86VQ1 547 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 SLC7A6Q92536 515 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 LRRC37BQ96QE4 947 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 NUAK2Q9H093 628 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 PLEK2Q9NYT0 353 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 VSX1Q9NZR4 365 aaPredicted RBP15.65■□□□□ 0.1
PSPC1-202ENST00000427943 ASH2LQ9UBL3 628 aa15.65■□□□□ 0.1
PSPC1-202ENST00000427943 FABP3P05413 133 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 COX5BP10606 129 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 RRM2P31350 389 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 SRP14P37108 136 aaKnown RBP15.64■□□□□ 0.09
PSPC1-202ENST00000427943 LMO4P61968 165 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 TEKQ02763 1124 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 HNRNPA0Q13151 305 aaKnown RBP15.64■□□□□ 0.09
PSPC1-202ENST00000427943 KRTAP24-1Q3LI83 254 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 ARL9Q6T311 187 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 ZER1Q7Z7L7 766 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.64■□□□□ 0.09
PSPC1-202ENST00000427943 GLB1L2Q8IW92 636 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 DEFB107AQ8IZN7 70 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 MCUR1Q96AQ8 359 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 TSSK2Q96PF2 358 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 ERMAPQ96PL5 475 aaPredicted RBP15.64■□□□□ 0.09
PSPC1-202ENST00000427943 WACQ9BTA9 647 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 MSL2Q9HCI7 577 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 POLR1DQ9Y2S0 133 aa15.64■□□□□ 0.09
PSPC1-202ENST00000427943 CLDN25C9JDP6 229 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 H3BSA7 217 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 DCTN6O00399 190 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 TIMM8AO60220 97 aaPredicted RBP15.63■□□□□ 0.09
PSPC1-202ENST00000427943 OR10H3O60404 316 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 DCTN3O75935 186 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 TXNDC12O95881 172 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 MSMBP08118 114 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 CENPAP49450 140 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 SMIM11AP58511 58 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 MEP1BQ16820 701 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 HFEQ30201 348 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 SPRNQ5BIV9 151 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 FAM209AQ5JX71 171 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 C1orf94Q6P1W5 598 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 C16orf89Q6UX73 402 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 PIGWQ7Z7B1 504 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 C1orf174Q8IYL3 243 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 TMEM186Q96B77 213 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 ELMOD3Q96FG2 381 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 REPIN1Q9BWE0 567 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms