RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 B4GALT1P15291 398 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 LIPAP38571 399 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 CLDN6P56747 220 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 EBPQ15125 230 aaKnown RBP12.56□□□□□ -0.4
RPL28-202ENST00000426763 AGAP6Q5VW22 663 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 USP51Q70EK9 711 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 SYT9Q86SS6 491 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 FAM83FQ8NEG4 500 aaPredicted RBP12.56□□□□□ -0.4
RPL28-202ENST00000426763 HYLS1Q96M11 299 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 SHISA8B8ZZ34 492 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 E9PI62 339 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 M0R036 132 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TFP02787 698 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 CT62P0C5K7 136 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 POU3F3P20264 500 aaPredicted RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 EIF2S3P41091 472 aaKnown RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 TMEM81Q6P7N7 255 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TMEM179BQ7Z7N9 219 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 SLC35B4Q969S0 331 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 CDCA4Q9BXL8 241 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 PRMT8Q9NR22 394 aaPredicted RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 GABARAPO95166 117 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 GDPD3Q7L5L3 318 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 MSRB3Q8IXL7 192 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 OR1M1Q8NGA1 313 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 OR56B2PQ8NGI1 322 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TMEM68Q96MH6 324 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 OR51J1Q9H342 316 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 BCO1Q9HAY6 547 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TRPM7Q96QT4 1865 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 DEGS1O15121 323 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 CHRM2P08172 466 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 SRD5A2P31213 254 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TAS2R20P59543 309 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 STPG1Q5TH74 334 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 MRM1Q6IN84 353 aaKnown RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 LPCAT3Q6P1A2 487 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 SLCO5A1Q9H2Y9 848 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 SIAEQ9HAT2 523 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 SPINT2O43291 252 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 RGS11O94810 467 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 PMPCAQ10713 525 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 ZNF141Q15928 474 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 C12orf45Q8N5I9 185 aaPredicted RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 BBS1Q8NFJ9 593 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 ANKRD9Q96BM1 317 aaPredicted RBP12.55□□□□□ -0.4
RPL28-202ENST00000426763 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TAS2R4Q9NYW5 299 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 R4GMQ9 66 aa12.55□□□□□ -0.4
RPL28-202ENST00000426763 TOR1AO14656 332 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 LIPCP11150 499 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 IL3RAP26951 378 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 RPL23AP62750 156 aaKnown RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 CTU2Q2VPK5 515 aaKnown RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 ZNF718Q3SXZ3 478 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 AADACL3Q5VUY0 350 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 ELFN2Q5R3F8 820 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 TMPRSS11FQ6ZWK6 438 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 LAX1Q8IWV1 398 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 SLC22A18ASQ8N1D0 253 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 OPALINQ96PE5 141 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 SPACA1Q9HBV2 294 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 CGGBP1Q9UFW8 167 aaPredicted RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 ETV6P41212 452 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 LACC1Q8IV20 430 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 APOBEC4Q8WW27 367 aaKnown RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 ALKBH3Q96Q83 286 aaPredicted RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 KCNJ15Q99712 375 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
RPL28-202ENST00000426763 OR8U9P0C7N5 309 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 GDNFP39905 211 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 TAAR8Q969N4 342 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 ZNF681Q96N22 645 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 FOXB1Q99853 325 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 ACKR4Q9NPB9 350 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 GPR84Q9NQS5 396 aa12.54□□□□□ -0.4
RPL28-202ENST00000426763 CD53P19397 219 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 SIRT3Q9NTG7 399 aaPredicted RBP12.53□□□□□ -0.4
RPL28-202ENST00000426763 B4E171 279 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 LILRB5O75023 590 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 SP9P0CG40 484 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 TSPAN7P41732 249 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms