RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ZNF620Q6ZNG0 422 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 Q6ZR03 302 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 RBM45Q8IUH3 476 aaKnown RBP12.26□□□□□ -0.45
PDAP1-202ENST00000426447 NPEPL1Q8NDH3 523 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 FAM110DQ8TAY7 271 aaPredicted RBP12.26□□□□□ -0.45
PDAP1-202ENST00000426447 HDAC2Q92769 488 aaKnown RBP12.26□□□□□ -0.45
PDAP1-202ENST00000426447 ZBTB9Q96C00 473 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
PDAP1-202ENST00000426447 RBP7Q96R05 134 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
PDAP1-202ENST00000426447 TMEM165Q9HC07 324 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 TCF7L1Q9HCS4 588 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 GCM1Q9NP62 436 aa12.26□□□□□ -0.45
PDAP1-202ENST00000426447 IGKV1D-43A0A0B4J1Z2 117 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 SLC22A31A6NKX4 558 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 ICMTO60725 284 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 LYPD3O95274 346 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 CST2P09228 141 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 CD247P20963 164 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 TUBG1P23258 451 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 FGF12P61328 243 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 PAGE3Q5JUK9 113 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 ARMC4Q5T2S8 1044 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 NLRC3Q7RTR2 1065 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 OR8B3Q8NGG8 313 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
PDAP1-202ENST00000426447 TBC1D15Q8TC07 691 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 SLC26A7Q8TE54 656 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 SPDL1Q96EA4 605 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 OR8B2Q96RD0 313 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 MEPEQ9NQ76 525 aaPredicted RBP12.25□□□□□ -0.45
PDAP1-202ENST00000426447 TUBG2Q9NRH3 451 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 KIF17Q9P2E2 1029 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 ASH2LQ9UBL3 628 aa12.25□□□□□ -0.45
PDAP1-202ENST00000426447 NDRG4Q9ULP0 352 aaKnown RBP12.25□□□□□ -0.45
PDAP1-202ENST00000426447 A0A1W2PPL8 197 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 OR7A10O76100 309 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 CYB5R3P00387 301 aaPredicted RBP12.24□□□□□ -0.45
PDAP1-202ENST00000426447 MT-ND1P03886 318 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 THRBP10828 461 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 KITLGP21583 273 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 MMP16P51512 607 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 LAPTM4AQ15012 233 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 SLC25A47Q6Q0C1 308 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 SLC30A8Q8IWU4 369 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 C11orf65Q8NCR3 313 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 GPR32P1Q8NGA4 272 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 MOSPD2Q8NHP6 518 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 AENQ8WTP8 325 aaKnown RBP12.24□□□□□ -0.45
PDAP1-202ENST00000426447 PTP4A1Q93096 173 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 HAVCR1Q96D42 359 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 SGTBQ96EQ0 304 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 TMEM246Q9BRR3 403 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 PCGF1Q9BSM1 259 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 POFUT1Q9H488 388 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 TBCCD1Q9NVR7 557 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 CCDC167Q9P0B6 97 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 CLN8Q9UBY8 286 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 STARD10Q9Y365 291 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 NOTCH1P46531 2555 aa12.24□□□□□ -0.45
PDAP1-202ENST00000426447 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
PDAP1-202ENST00000426447 LRRC30A6NM36 301 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 C12orf71A8MTZ7 269 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 MELTFP08582 738 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 PITPNBP48739 271 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 GUCY1A3Q02108 690 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 TOP3AQ13472 1001 aaPredicted RBP12.23□□□□□ -0.45
PDAP1-202ENST00000426447 CYP51A1Q16850 503 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 RUSC1-AS1Q66K80 236 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 C1orf94Q6P1W5 598 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 VASH1Q7L8A9 365 aaPredicted RBP12.23□□□□□ -0.45
PDAP1-202ENST00000426447 MAVSQ7Z434 540 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 PTOV1Q86YD1 416 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 FUNDC1Q8IVP5 155 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 OR5AS1Q8N127 324 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 OR4D11Q8NGI4 311 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 PFN4Q8NHR9 129 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 LINC01006Q8NI28 216 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 FNDC8Q8TC99 324 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 DYRK2Q92630 601 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 NMD3Q96D46 503 aaKnown RBP12.23□□□□□ -0.45
PDAP1-202ENST00000426447 COG8Q96MW5 612 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 ZNF426Q9BUY5 554 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 TXNIPQ9H3M7 391 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 TANC2Q9HCD6 1990 aa12.23□□□□□ -0.45
PDAP1-202ENST00000426447 TSPAN15O95858 294 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 MSR1P21757 451 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 HTR5AP47898 357 aa12.22□□□□□ -0.45
PDAP1-202ENST00000426447 SRP9P49458 86 aaKnown RBP12.22□□□□□ -0.45
PDAP1-202ENST00000426447 WDR4P57081 412 aaKnown RBP12.22□□□□□ -0.45
PDAP1-202ENST00000426447 PCBP3P57721 371 aaKnown RBP12.22□□□□□ -0.45
PDAP1-202ENST00000426447 RPL15P61313 204 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms