RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 CLCC1Q96S66 551 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 TRIM2Q9C040 744 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 DUSP22Q9NRW4 184 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 GSKIPQ9P0R6 139 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 GRHPRQ9UBQ7 328 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 EIF1AYO14602 144 aaKnown RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 WISP1O95388 367 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 MUC1P15941 1255 aaPredicted RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 CD1CP29017 333 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 RPS15AP62244 130 aaKnown RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 ENPP2Q13822 863 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 PRICKLE4Q2TBC4 344 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 KRBOX4Q5JUW0 171 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 CLEC9AQ6UXN8 241 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 ZC3H10Q96K80 434 aaKnown RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 CMTM3Q96MX0 182 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 NAA11Q9BSU3 229 aaPredicted RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 TCEAL2Q9H3H9 227 aaPredicted RBP12.15□□□□□ -0.46
LRCH3-203ENST00000425562 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
LRCH3-203ENST00000425562 K7EQS6 105 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 MPZL1O95297 269 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 PMP2P02689 132 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 CELA2BP08218 269 aaPredicted RBP12.15□□□□□ -0.47
LRCH3-203ENST00000425562 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.47
LRCH3-203ENST00000425562 SDHAP31040 664 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 CD80P33681 288 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 SERPINF1P36955 418 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 OR2B8PP59922 312 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 MFGE8Q08431 387 aaPredicted RBP12.15□□□□□ -0.47
LRCH3-203ENST00000425562 GGTLC2Q14390 218 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 SMCO1Q147U7 214 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 ZNF684Q5T5D7 378 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 ZNF585AQ6P3V2 769 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 USP53Q70EK8 1073 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 OR9A4Q8NGU2 314 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 ZNF417Q8TAU3 575 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 GPX8Q8TED1 209 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.47
LRCH3-203ENST00000425562 LAT2Q9GZY6 243 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 KIR3DX1Q9H7L2 352 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 UQCC1Q9NVA1 299 aa12.15□□□□□ -0.47
LRCH3-203ENST00000425562 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 C9JQL5 133 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 OR2F2O95006 317 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 GPR143P51810 404 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 OR2F1Q13607 317 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 PEA15Q15121 130 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 ZNF584Q8IVC4 421 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 C7orf61Q8IZ16 206 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 PRR22Q8IZ63 422 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 SEMA6DQ8NFY4 1073 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 KTI12Q96EK9 354 aaPredicted RBP12.14□□□□□ -0.47
LRCH3-203ENST00000425562 CHMP1AQ9HD42 196 aaPredicted RBP12.14□□□□□ -0.47
LRCH3-203ENST00000425562 UPB1Q9UBR1 384 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 VPS13AQ96RL7 3174 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 RAB19A4D1S5 217 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 GPR75O95800 540 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 ABHD16AO95870 558 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 HRH1P35367 487 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 F2RL1P55085 397 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 MPPED2Q15777 294 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 RNASE10Q5GAN6 216 aaKnown RBP12.14□□□□□ -0.47
LRCH3-203ENST00000425562 PAPD4Q6PIY7 484 aaKnown RBP12.14□□□□□ -0.47
LRCH3-203ENST00000425562 FAM122BQ7Z309 247 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 OR4K17Q8NGC6 315 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 ARL11Q969Q4 196 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
LRCH3-203ENST00000425562 SLC41A2Q96JW4 573 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
LRCH3-203ENST00000425562 LOC101059948A0A1B0GTJ6 334 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 S100A9P06702 114 aaKnown RBP12.13□□□□□ -0.47
LRCH3-203ENST00000425562 CPT2P23786 658 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 EIF1AXP47813 144 aaKnown RBP12.13□□□□□ -0.47
LRCH3-203ENST00000425562 ACTBP60709 375 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 ACTG1P63261 375 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 PMPCAQ10713 525 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 CLINT1Q14677 625 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 MESTQ5EB52 335 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 MARCH1Q8TCQ1 289 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 SLC25A44Q96H78 314 aaPredicted RBP12.13□□□□□ -0.47
LRCH3-203ENST00000425562 LPAR4Q99677 370 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 ZNF426Q9BUY5 554 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 NMNAT2Q9BZQ4 307 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 RPS10P5Q9NQ39 176 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 GHRLQ9UBU3 117 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 HOXB2P14652 356 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 HTR2CP28335 458 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 CD96P40200 585 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 S100A10P60903 97 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 RPL18Q07020 188 aaKnown RBP12.13□□□□□ -0.47
LRCH3-203ENST00000425562 C1orf61Q13536 156 aa12.13□□□□□ -0.47
LRCH3-203ENST00000425562 HABP2Q14520 560 aaPredicted RBP12.13□□□□□ -0.47
LRCH3-203ENST00000425562 ABHD13Q7L211 337 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms