RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ARL6IP5O75915 188 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 AKR7A3O95154 331 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 IL2RAP01589 272 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 RNF224P0DH78 156 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 TIMP3P35625 211 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 SLC35A1P78382 337 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 MXD1Q05195 221 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 SLC3A1Q07837 685 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 CDK5R1Q15078 307 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 MS4A18Q3C1V0 323 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 FCRLAQ7L513 359 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 CDC20BQ86Y33 519 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 ABHD3Q8WU67 409 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 ZNRF4Q8WWF5 429 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 GHSRQ92847 366 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 KCTD12Q96CX2 325 aaKnown RBP13.83□□□□□ -0.2
SHOX2-202ENST00000425436 COX4I2Q96KJ9 171 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 SYT4Q9H2B2 425 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 TBCCD1Q9NVR7 557 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 PLEKHB1Q9UF11 243 aaPredicted RBP13.83□□□□□ -0.2
SHOX2-202ENST00000425436 LAMP5Q9UJQ1 280 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 GNG8Q9UK08 70 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF175Q9Y473 711 aa13.83□□□□□ -0.2
SHOX2-202ENST00000425436 SIRT4Q9Y6E7 314 aaPredicted RBP13.83□□□□□ -0.2
SHOX2-202ENST00000425436 FASNP49327 2511 aaKnown RBP13.82□□□□□ -0.2
SHOX2-202ENST00000425436 TRBV2A0A0J9YWF9 115 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 A0A1B0GVG6 124 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 E9PI62 339 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 CTDSP2O14595 271 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 RAMP1O60894 148 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 TMEM127O75204 238 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 UPK1BO75841 260 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 SC5DO75845 299 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 KRT8P05787 483 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 CEACAM8P31997 349 aaPredicted RBP13.82□□□□□ -0.2
SHOX2-202ENST00000425436 TNFSF8P32971 234 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 PPP3R1P63098 170 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 TP53I3Q53FA7 332 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF684Q5T5D7 378 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 SSX6Q7RTT6 188 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 CEACAM19Q7Z692 300 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
SHOX2-202ENST00000425436 PGLYRP3Q96LB9 341 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 MROQ9BYG7 248 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 RNF122Q9H9V4 155 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 KLHL13Q9P2N7 655 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
SHOX2-202ENST00000425436 NCOA6Q14686 2063 aaPredicted RBP13.82□□□□□ -0.2
SHOX2-202ENST00000425436 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
SHOX2-202ENST00000425436 TRAV1-2A0A0B4J238 106 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 LOC102725191A0A1B0GVB3 256 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 SLC22A23A1A5C7 686 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 TMIGD3P0DMS9 266 aaPredicted RBP13.81□□□□□ -0.2
SHOX2-202ENST00000425436 CD8BP10966 210 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 EDNRAP25101 427 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 GDI2P50395 445 aaKnown RBP13.81□□□□□ -0.2
SHOX2-202ENST00000425436 HCCSP53701 268 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 GLO1Q04760 184 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 CDSNQ15517 529 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 ACSM3Q53FZ2 586 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 RIPPLY2Q5TAB7 128 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF544Q6NX49 715 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 MTFR2Q6P444 385 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 DCDC5Q6ZRR9 648 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 MRGPRGQ86SM5 289 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 LIX1LQ8IVB5 337 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF454Q8N9F8 522 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 TSSK2Q96PF2 358 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 COPS3Q9UNS2 423 aa13.81□□□□□ -0.2
SHOX2-202ENST00000425436 INTS1Q8N201 2190 aaKnown RBP13.81□□□□□ -0.2
SHOX2-202ENST00000425436 FAM171A2A8MVW0 826 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 SLC16A7O60669 478 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF432O94892 652 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 PLGP00747 810 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 CLEC2LP0C7M8 214 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 FCGR2AP12318 317 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 ALOX5APP20292 161 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 DEFA1P59665 94 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 DEFA3P59666 94 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 H3F3AP84243 136 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 RASGEF1BQ0VAM2 473 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 TRIM16LQ309B1 348 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 YIF1BQ5BJH7 314 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 METAP1DQ6UB28 335 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 SLC35D2Q76EJ3 337 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 CENPSQ8N2Z9 138 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 KDM8Q8N371 416 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 CNEP1R1Q8N9A8 125 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 RPS4Y2Q8TD47 263 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 RNF128Q8TEB7 428 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 SMAP2Q8WU79 429 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 THRSPQ92748 146 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 PPP1R14BQ96C90 147 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 NAA11Q9BSU3 229 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 COQ3Q9NZJ6 369 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 UTP20O75691 2785 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms