RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 WNK2Q9Y3S1 2297 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 IGLV3-9A0A075B6K5 115 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 DHRS12A0PJE2 317 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 PRSS37A4D1T9 235 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 SLC16A7O60669 478 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 PTHP01270 115 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 LCKP06239 509 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 RAP2AP10114 183 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 NAT2P11245 290 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 ACHEP22303 614 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 FPR3P25089 353 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
VRK3-203ENST00000424804 FXYD6P3P58550 94 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 TBC1D28Q2M2D7 210 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 RFX4Q33E94 735 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 PABPC1L2AQ5JQF8 200 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 TMEM255AQ5JRV8 349 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 GPR139Q6DWJ6 353 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 LEG1Q6P5S2 330 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 FAM122BQ7Z309 247 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 DPPA2Q7Z7J5 298 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 AQP11Q8NBQ7 271 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 SEMA6DQ8NFY4 1073 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 OR52L1Q8NGH7 329 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 OR4K13Q8NH42 304 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 RDH5Q92781 318 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 NABP1Q96AH0 204 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 EGLN3Q9H6Z9 239 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 VNN3Q9NY84 501 aa11.07□□□□□ -0.64
VRK3-203ENST00000424804 COA3Q9Y2R0 106 aaPredicted RBP11.07□□□□□ -0.64
VRK3-203ENST00000424804 B4DSR2 109 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 ACOT8O14734 319 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 TCF21O43680 179 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 KHDRBS3O75525 346 aaKnown RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 GPANK1O95872 356 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 RENP00797 406 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 CST1P01037 141 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 AVPP01185 164 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 GASTP01350 101 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 ERCC1P07992 297 aaPredicted RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 MMP7P09237 267 aaPredicted RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 ZNF250P15622 560 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 CTLA4P16410 223 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 MSR1P21757 451 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 MAGEA2P43356 314 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 MAGEB1P43366 347 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 GSSP48637 474 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 TMEM33P57088 247 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 ERVS71-1P61550 626 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 MRPS11P82912 194 aaKnown RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 DBPQ10586 325 aaPredicted RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 TSPAN31Q12999 210 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 NRN1LQ496H8 165 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 SLC35F1Q5T1Q4 408 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 LIPNQ5VXI9 398 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 C1orf94Q6P1W5 598 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 UGT2A3Q6UWM9 527 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 PTCHD4Q6ZW05 846 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 ADGRG5Q8IZF4 528 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 OR1J2Q8NGS2 313 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 CANT1Q8WVQ1 401 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 GPX7Q96SL4 187 aaPredicted RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 CHID1Q9BWS9 393 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 NUAK2Q9H093 628 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 FN3KQ9H479 309 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 SRA1Q9HD15 236 aaKnown RBP11.06□□□□□ -0.64
VRK3-203ENST00000424804 TBC1D23Q9NUY8 699 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 TREM2Q9NZC2 230 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 SLC7A8Q9UHI5 535 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 DUSP13Q9UII6 198 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 POLR1DQ9Y2S0 133 aa11.06□□□□□ -0.64
VRK3-203ENST00000424804 A0A1W2PPW3 197 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 C5orf49A4QMS7 147 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 AQP12BA6NM10 295 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 GSC2O15499 205 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 MGRN1O60291 552 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 SOX14O95416 240 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 SCG5P05408 212 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 CST2P09228 141 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 GAAP10253 952 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 STOMP27105 288 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 CDKN2AP42771 156 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 GDI2P50395 445 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 RASSF2P50749 326 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 PCBD1P61457 104 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 RPS23P62266 143 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 PSG4Q00888 419 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 BNIP1Q12981 228 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 MICAQ29983 383 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 FAM27BQ5VT28 67 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 ZNF774Q6NX45 483 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 ZNF620Q6ZNG0 422 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 ADCK1Q86TW2 530 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 AQP12AQ8IXF9 295 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms