RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PRKACAP17612 351 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CXCR1P25024 350 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 HSD11B1P28845 292 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 DLSTP36957 453 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CX3CR1P49238 355 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 LUMP51884 338 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 SLC37A1P57057 533 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 DCDP81605 110 aaKnown RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 MELKQ14680 651 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 STK11Q15831 433 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CBLN3Q6UW01 205 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 DRAM2Q6UX65 266 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF627Q7L945 461 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 INO80EQ8NBZ0 244 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 TMEM185AQ8NFB2 350 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 OR52N5Q8NH56 324 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 METTL21AQ8WXB1 218 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 UQCC2Q9BRT2 126 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 NMES1Q9C002 83 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 UCK1Q9HA47 277 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 STARD5Q9NSY2 213 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 HPF1Q9NWY4 346 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 ANAPC10Q9UM13 185 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 NOP16Q9Y3C1 178 aaKnown RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 MRPS18BQ9Y676 258 aaKnown RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CEACAM18A8MTB9 384 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 H7C2Y5 167 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 OR6A2O95222 327 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 BPNT1O95861 308 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 LYL1P12980 280 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 PGCP20142 388 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 MAOBP27338 520 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 PRKXP51817 358 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 RNASE10Q5GAN6 216 aaKnown RBP13.67□□□□□ -0.22
C9orf3-204ENST00000424143 DHRS7BQ6IAN0 325 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-204ENST00000424143 C3orf33Q6P1S2 294 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF563Q8TA94 476 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 PPP1R1CQ8WVI7 109 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 SLC25A44Q96H78 314 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-204ENST00000424143 ABHD6Q9BV23 337 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF471Q9BX82 626 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-204ENST00000424143 SLC6A17Q9H1V8 727 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 TAS2R4Q9NYW5 299 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 KLK13Q9UKR3 277 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 SLC22A13Q9Y226 551 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 VSIG4Q9Y279 399 aa13.67□□□□□ -0.22
C9orf3-204ENST00000424143 FITM1A5D6W6 292 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 A6NIZ1 184 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 ALG1L2C9J202 215 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 H7C1C5 153 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 M0QYG6 137 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 RAD1O60671 282 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 HLA-AP01891 365 aaKnown RBP13.66□□□□□ -0.22
C9orf3-204ENST00000424143 HEXAP06865 529 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 GABRA4P48169 554 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 RAP1BP61224 184 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 LCN6P62502 163 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 RAP1AP62834 184 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 S100A12P80511 92 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 INSM1Q01101 510 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-204ENST00000424143 DEFA5Q01523 94 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 ZP4Q12836 540 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 ACKR1Q16570 336 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 SHEQ5VZ18 495 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 NSUN5P2Q63ZY6 315 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 AWAT2Q6E213 333 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 ELP2Q6IA86 826 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 LRRC69Q6ZNQ3 347 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 Q6ZSR6 202 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 TMED4Q7Z7H5 227 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 PLPP7Q8NBV4 271 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 FAM174AQ8TBP5 190 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 FAM46BQ96A09 425 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 PDCD10Q9BUL8 212 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 PTDSS2Q9BVG9 487 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 GPR27Q9NS67 375 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF230Q9UIE0 474 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-204ENST00000424143 GDF2Q9UK05 429 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-204ENST00000424143 TMEM131Q92545 1883 aa13.66□□□□□ -0.22
C9orf3-204ENST00000424143 PQLC2LA1A4F0 135 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 FAM74A7A6NL05 159 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 RAB27BO00194 218 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 ALOX12BO75342 701 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 GP1BBP13224 206 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 TPT1P13693 172 aaKnown RBP13.65□□□□□ -0.22
C9orf3-204ENST00000424143 DNASE1L1P49184 302 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 CCR4P51679 360 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 CXADRP78310 365 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 ADAM8P78325 824 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 MRPS21P82921 87 aaKnown RBP13.65□□□□□ -0.22
C9orf3-204ENST00000424143 QRFPP83859 136 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 GLO1Q04760 184 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 TAF13Q15543 124 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 FAM74A3Q4VXF1 159 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 ACTBL2Q562R1 376 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 PRAMEF17Q5VTA0 474 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 DNM1P34Q6PK57 102 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 IL34Q6ZMJ4 242 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 C17orf107Q6ZR85 190 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms