RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OFCC1Q8IZS5 231 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 OR51A7Q8NH64 312 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 C22orf15Q8WYQ4 148 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 FNDC11Q9BVV2 318 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 EFCAB1Q9HAE3 211 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 A4GNTQ9UNA3 340 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 NPTNQ9Y639 398 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 EFCAB9A8MZ26 197 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 H7C1C5 153 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 NME4O00746 187 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 IFNW1P05000 195 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 RPL4P36578 427 aaKnown RBP13.66□□□□□ -0.22
COL18A1-205ENST00000423214 YAP1P46937 504 aaKnown RBP13.66□□□□□ -0.22
COL18A1-205ENST00000423214 NUDT2P50583 147 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 SLC7A2P52569 658 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 LCN6P62502 163 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 SELENOWP63302 87 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 SCRN3Q0VDG4 424 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 ENDOGQ14249 297 aaKnown RBP13.66□□□□□ -0.22
COL18A1-205ENST00000423214 TRAM2Q15035 370 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 ANKDD1AQ495B1 522 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 RBMS3Q6XE24 437 aaKnown RBP13.66□□□□□ -0.22
COL18A1-205ENST00000423214 SYT9Q86SS6 491 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 SPICQ8N5J4 248 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 OR13C2Q8NGS9 318 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 POLE4Q9NR33 117 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 DDX28Q9NUL7 540 aaKnown RBP13.66□□□□□ -0.22
COL18A1-205ENST00000423214 RHCGQ9UBD6 479 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 PPIAL4AQ9Y536 164 aa13.66□□□□□ -0.22
COL18A1-205ENST00000423214 CXCR6O00574 342 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 XKRYO14609 159 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 GSTA4O15217 222 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 SGCEO43556 437 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 SBK2P0C263 348 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 COX5BP10606 129 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 TNFRSF1AP19438 455 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 FUT4P22083 530 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 SLC9A3P48764 834 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 UBA52P62987 128 aaKnown RBP13.65□□□□□ -0.22
COL18A1-205ENST00000423214 C8orf82Q6P1X6 216 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-205ENST00000423214 ZNF730Q6ZMV8 503 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 ARPINQ7Z6K5 226 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 VTCN1Q7Z7D3 282 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 CPLX4Q7Z7G2 160 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 KLHL36Q8N4N3 616 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 OR2Z1Q8NG97 314 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 POP5Q969H6 163 aaKnown RBP13.65□□□□□ -0.22
COL18A1-205ENST00000423214 ZNF570Q96NI8 536 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 DCLRE1CQ96SD1 692 aaKnown RBP13.65□□□□□ -0.22
COL18A1-205ENST00000423214 HOPXQ9BPY8 73 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-205ENST00000423214 WACQ9BTA9 647 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 MYLK2Q9H1R3 596 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 EMC7Q9NPA0 242 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 ESM1Q9NQ30 184 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 TMEM106BQ9NUM4 274 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 GRHPRQ9UBQ7 328 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 OPN4Q9UHM6 478 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 PURGQ9UJV8 347 aaKnown RBP13.65□□□□□ -0.22
COL18A1-205ENST00000423214 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
COL18A1-205ENST00000423214 PPIAL4EA0A075B759 164 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 PPIAL4CA0A0B4J2A2 164 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 PPIAL4DF5H284 164 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 SURF4O15260 269 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 ZNF682O95780 498 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 FSHBP01225 129 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 PPIAL4FP0DN26 164 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 GPR4P46093 362 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 GSK3BP49841 420 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 PSG7Q13046 419 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 AWAT1Q58HT5 328 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 SPRNQ5BIV9 151 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 ZDHHC22Q8N966 263 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 LRRC75AQ8NAA5 344 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 COG8Q96MW5 612 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 MRI1Q9BV20 369 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 MAN2C1Q9NTJ4 1040 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 DCAF16Q9NXF7 216 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 PLEK2Q9NYT0 353 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 MGAM2Q2M2H8 2515 aa13.64□□□□□ -0.23
COL18A1-205ENST00000423214 J3KTA2 159 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 SNX3O60493 162 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 NCK1P16333 377 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 TUBG1P23258 451 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 PSME3P61289 254 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 BTG1P62324 171 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 PRKCDQ05655 676 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 CDK5R2Q13319 367 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 AQP6Q13520 282 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 RRM2BQ7LG56 351 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 ACOT11Q8WXI4 607 aaPredicted RBP13.63□□□□□ -0.23
COL18A1-205ENST00000423214 CMTM5Q96DZ9 223 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 SAMD8Q96LT4 415 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 POFUT1Q9H488 388 aa13.63□□□□□ -0.23
COL18A1-205ENST00000423214 PATZ1Q9HBE1 687 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms