RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 EIF3KQ9UBQ5 218 aaKnown RBP13.63□□□□□ -0.23
BRAT1-202ENST00000421712 ANKRD17O75179 2603 aaKnown RBP13.62□□□□□ -0.23
BRAT1-202ENST00000421712 RAI1Q7Z5J4 1906 aaPredicted RBP13.62□□□□□ -0.23
BRAT1-202ENST00000421712 RTTNQ86VV8 2226 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 TFP02787 698 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 OR4A8P0C604 315 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 FAM157BP0CG42 384 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 SERPINF1P36955 418 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 RAD52P43351 418 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 HTR5AP47898 357 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 ADAM8P78325 824 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 PLBD1Q6P4A8 553 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 TMEM154Q6P9G4 183 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 CORO6Q6QEF8 472 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 LINC00346Q8IVM7 164 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 PQLC1Q8N2U9 271 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 PAQR4Q8N4S7 273 aaPredicted RBP13.62□□□□□ -0.23
BRAT1-202ENST00000421712 ZNRF4Q8WWF5 429 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 PERPQ96FX8 193 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 PRRG3Q9BZD7 231 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 GRIP2Q9C0E4 1043 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 CBLN4Q9NTU7 201 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
BRAT1-202ENST00000421712 PLCE1Q9P212 2302 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 RER1O15258 196 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 TMCC2O75069 709 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 CD8AP01732 235 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 LCKP06239 509 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 BMP4P12644 408 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 CDKN1AP38936 164 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 BLVRAP53004 296 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 RPS7P62081 194 aaKnown RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 RPS23P62266 143 aaKnown RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 ADIPOQQ15848 244 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 CPOQ8IVL8 374 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 PTP4A1Q93096 173 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 TRMT61AQ96FX7 289 aaKnown RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 PITX2Q99697 317 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 C9orf16Q9BUW7 83 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 TRAF4Q9BUZ4 470 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 NMNAT2Q9BZQ4 307 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 MRPL22Q9NWU5 206 aaKnown RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 TMEFF2Q9UIK5 374 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 NDRG4Q9ULP0 352 aaKnown RBP13.61□□□□□ -0.23
BRAT1-202ENST00000421712 FZR1Q9UM11 496 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 LHFPL6Q9Y693 200 aa13.61□□□□□ -0.23
BRAT1-202ENST00000421712 CSMD2Q7Z408 3487 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 CREBBPQ92793 2442 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 LOC100509620A0A075B734 347 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 EI24O14681 340 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 GPRIN2O60269 458 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 SNAP29O95721 258 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 SPARCP09486 303 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 GLRXP35754 106 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 RPS27P42677 84 aaKnown RBP13.6□□□□□ -0.23
BRAT1-202ENST00000421712 UCP2P55851 309 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 PPP2R2BQ00005 443 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 CCDC92Q53HC0 331 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-202ENST00000421712 ARL9Q6T311 187 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 LYPD4Q6UWN0 246 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 UNQ6126/PRO20091Q6UXV3 157 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 ZBTB49Q6ZSB9 765 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 VASH1Q7L8A9 365 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-202ENST00000421712 DTX2Q86UW9 622 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 CBR4Q8N4T8 237 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 OR1F12Q8NHA8 337 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 EME1Q96AY2 570 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 POM121L2Q96KW2 1035 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 FOXC2Q99958 501 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 HCAR1Q9BXC0 346 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 CACNG6Q9BXT2 260 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 PLK3Q9H4B4 646 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 ZNF442Q9H7R0 627 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 WDR76Q9H967 626 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 GDF2Q9UK05 429 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-202ENST00000421712 GRIP1Q9Y3R0 1128 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 PMF1-BGLAPU3KQ54 211 aa13.6□□□□□ -0.23
BRAT1-202ENST00000421712 ZAR1LA6NP61 321 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 ZNF593O00488 134 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 TLX2O43763 284 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 GLCEO94923 617 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 COX5BP10606 129 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 PCSK6P29122 969 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 EPHA2P29317 976 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 GSTT1P30711 240 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 POLR2IP36954 125 aaKnown RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 PTH2RP49190 550 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 ALDH3A2P51648 485 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 RAD23AP54725 363 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 ATP5J2P56134 94 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 SELENOVP59797 346 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 SNRPD2P62316 118 aaKnown RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 NKX6-1P78426 367 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 RAB35Q15286 201 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 ZIK1Q3SY52 487 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 ELFN2Q5R3F8 820 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 RGS7BPQ6MZT1 257 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 SLC18B1Q6NT16 456 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms