RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 FOXN4Q96NZ1 517 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 RBM4Q9BWF3 364 aaKnown RBP9.07□□□□□ -0.96
RFC1-203ENST00000418436 NMNAT2Q9BZQ4 307 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 WNT5BQ9H1J7 359 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 RERGLQ9H628 205 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 ZNF556Q9HAH1 456 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 RPRD1BQ9NQG5 326 aaKnown RBP9.07□□□□□ -0.96
RFC1-203ENST00000418436 FRRS1LQ9P0K9 344 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 KLHL21Q9UJP4 597 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 SPEF1Q9Y4P9 236 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 ARID1AO14497 2285 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 RTTNQ86VV8 2226 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 VPS13CQ709C8 3753 aa9.07□□□□□ -0.96
RFC1-203ENST00000418436 LOC100509620A0A075B734 347 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 B9A039 149 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 H3BN98 237 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 ICMTO60725 284 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 RGS9O75916 674 aaPredicted RBP9.06□□□□□ -0.96
RFC1-203ENST00000418436 GPANK1O95872 356 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 TFP02787 698 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 OR4A8P0C604 315 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 COX5BP10606 129 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 CCL2P13500 99 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 STOMP27105 288 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 APEX1P27695 318 aaKnown RBP9.06□□□□□ -0.96
RFC1-203ENST00000418436 PCSK6P29122 969 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 GRK5P34947 590 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 CDKN1AP38936 164 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 DAPP51397 102 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 SLC25A1P53007 311 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 HIST1H3AP68431 136 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 CDK5Q00535 292 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 HSF2Q03933 536 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 GLO1Q04760 184 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 SCRN3Q0VDG4 424 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 DBPQ10586 325 aaPredicted RBP9.06□□□□□ -0.96
RFC1-203ENST00000418436 SNTB2Q13425 540 aaKnown RBP9.06□□□□□ -0.96
RFC1-203ENST00000418436 AQP6Q13520 282 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 KPNB1Q14974 876 aaKnown RBP9.06□□□□□ -0.96
RFC1-203ENST00000418436 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 TBC1D28Q2M2D7 210 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 HIST2H3PS2Q5TEC6 136 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 KRT80Q6KB66 452 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 ACSM5Q6NUN0 579 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 SLC27A4Q6P1M0 643 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 HIST2H3AQ71DI3 136 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 AMIGO2Q86SJ2 522 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 HIPK1Q86Z02 1210 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 PARP8Q8N3A8 854 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 ATG16L2Q8NAA4 619 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 CYB561A3Q8NBI2 242 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 AKR7LQ8NHP1 331 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 TEX47Q8TBZ9 253 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 ZNRF4Q8WWF5 429 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 PERPQ96FX8 193 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 GABARAPL1Q9H0R8 117 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 FN3KQ9H479 309 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 CMC2Q9NRP2 79 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 USF3Q68DE3 2245 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 CELSR1Q9NYQ6 3014 aa9.06□□□□□ -0.96
RFC1-203ENST00000418436 ITPR3Q14573 2671 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 TMEM129A0AVI4 362 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 VSTM5A8MXK1 200 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 G3V2T6 193 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 H3BNX3 289 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 H7C417 338 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 GPRIN2O60269 458 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 IFNGP01579 166 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 APLNRP35414 380 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 EVX1P49640 407 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 ATP5J2P56134 94 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 GALK2Q01415 458 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 TEKQ02763 1124 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 CRMP1Q14194 572 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 GINS1Q14691 196 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 MEP1BQ16820 701 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 Q5PR19 223 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 OTPQ5XKR4 325 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 KDM4DQ6B0I6 523 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 ZNF774Q6NX45 483 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 ZFP1Q6P2D0 407 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 TGIF2LYQ8IUE0 185 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 SVOPLQ8N434 492 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 IQCF1Q8N6M8 205 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 WFDC11Q8NEX6 87 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 OR2T4Q8NH00 348 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 PYDC1Q8WXC3 89 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 TRMT61AQ96FX7 289 aaKnown RBP9.05□□□□□ -0.96
RFC1-203ENST00000418436 CENPNQ96H22 339 aaPredicted RBP9.05□□□□□ -0.96
RFC1-203ENST00000418436 RAB3IPQ96QF0 476 aaPredicted RBP9.05□□□□□ -0.96
RFC1-203ENST00000418436 DOK1Q99704 481 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 CACNG6Q9BXT2 260 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 PLK3Q9H4B4 646 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 CDH20Q9HBT6 801 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 SLC25A19Q9HC21 320 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 PAPOLBQ9NRJ5 636 aaKnown RBP9.05□□□□□ -0.96
RFC1-203ENST00000418436 MRPL22Q9NWU5 206 aaKnown RBP9.05□□□□□ -0.96
RFC1-203ENST00000418436 ASH2LQ9UBL3 628 aa9.05□□□□□ -0.96
RFC1-203ENST00000418436 LHFPL6Q9Y693 200 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms