RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 LCN8Q6JVE9 175 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 C1orf94Q6P1W5 598 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 PRIMA1Q86XR5 153 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 ZNF101Q8IZC7 436 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 CCDC124Q96CT7 223 aaKnown RBP13.11□□□□□ -0.31
NUP50-204ENST00000417702 CLPTM1LQ96KA5 538 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 LRGUKQ96M69 825 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 IFT27Q9BW83 186 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 NUAK2Q9H093 628 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 CHODLQ9H9P2 273 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 COA3Q9Y2R0 106 aaPredicted RBP13.11□□□□□ -0.31
NUP50-204ENST00000417702 POLR1DQ9Y2S0 133 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■■■□□ 15.8
NUP50-204ENST00000417702 TNFRSF11BO00300 401 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 ARPC3O15145 178 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 DOK2O60496 412 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 LMX1BO60663 402 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 ABHD16AO95870 558 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 RENP00797 406 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 IGHV3-13P01766 116 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 TACSTD2P09758 323 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 ACHEP22303 614 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 NOS3P29474 1203 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
NUP50-204ENST00000417702 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
NUP50-204ENST00000417702 HTR5AP47898 357 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 GSSP48637 474 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 HMGA2P52926 109 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 PPP1CBP62140 327 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
NUP50-204ENST00000417702 MS4A2Q01362 244 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 GLO1Q04760 184 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 AQP6Q13520 282 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 SPATA46Q5T0L3 261 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 SLC25A40Q8TBP6 338 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 HPS1Q92902 700 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
NUP50-204ENST00000417702 C4orf45Q96LM5 186 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 TRIM15Q9C019 465 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 MAGIXQ9H6Y5 334 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 TMEM160Q9NX00 188 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 PLEK2Q9NYT0 353 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 KCNS2Q9ULS6 477 aa13.1□□□□□ -0.31
NUP50-204ENST00000417702 PLSCR5A0PG75 271 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 LRP5LA4QPB2 252 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 H3BSA7 217 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
NUP50-204ENST00000417702 IDH3BO43837 385 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 ICMTO60725 284 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 LILRA1O75019 489 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 NCR1O76036 304 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 IFNA2P01563 188 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 COL8A2P25067 703 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 MAGEB1P43366 347 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 TMEM33P57088 247 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 CCL8P80075 99 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 FAM98BQ52LJ0 330 aaKnown RBP13.09□□□□□ -0.31
NUP50-204ENST00000417702 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
NUP50-204ENST00000417702 PGBD2Q6P3X8 592 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 LEG1Q6P5S2 330 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 VASH1Q7L8A9 365 aaPredicted RBP13.09□□□□□ -0.31
NUP50-204ENST00000417702 OR52L1Q8NGH7 329 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 OR4K13Q8NH42 304 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
NUP50-204ENST00000417702 MSI2Q96DH6 328 aaKnown RBP13.09□□□□□ -0.31
NUP50-204ENST00000417702 SNX18Q96RF0 628 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 BEX2Q9BXY8 128 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 OR2J1Q9GZK6 312 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 ASH2LQ9UBL3 628 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 LPAR3Q9UBY5 353 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 LYVE1Q9Y5Y7 322 aa13.09□□□□□ -0.31
NUP50-204ENST00000417702 TCRBV5S2A0A599 114 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 GSC2O15499 205 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 CCNB2O95067 398 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 MPZL1O95297 269 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 TGFAP01135 160 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 NGFP01138 241 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 HIST1H1CP16403 213 aaKnown RBP13.08□□□□□ -0.32
NUP50-204ENST00000417702 GSTM3P21266 225 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 TUBG1P23258 451 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 LIPAP38571 399 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 MPV17P39210 176 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 MAGEA2P43356 314 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 ZNF81P51508 661 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 CBX1P83916 185 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 TEKQ02763 1124 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 KCNMB1Q16558 191 aa13.08□□□□□ -0.32
NUP50-204ENST00000417702 RPL13AP3Q6NVV1 102 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms