RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ZNF627Q7L945 461 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 DPY19L4Q7Z388 723 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 FAM220AQ7Z4H9 259 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 DCXRQ7Z4W1 244 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 KRT77Q7Z794 578 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 SYT9Q86SS6 491 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 OR1J2Q8NGS2 313 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 AKR7LQ8NHP1 331 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 LINC01560Q8TB33 94 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 RADILQ96JH8 1075 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 DDOQ99489 341 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 MNTQ99583 582 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 COPS4Q9BT78 406 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 TTTY10Q9BZA0 68 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 YIPF3Q9GZM5 350 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 HDHD2Q9H0R4 259 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 ESRP2Q9H6T0 727 aaKnown RBP7.4□□□□□ -1.22
TRIM48-201ENST00000417545 AMBNQ9NP70 447 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 CENPMQ9NSP4 180 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 POU2F3Q9UKI9 436 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 TPRKBQ9Y3C4 175 aa7.4□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF462Q96JM2 2506 aa7.4□□□□□ -1.23
TRIM48-201ENST00000417545 CACNA1CQ13936 2221 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF878C9JN71 531 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 CRYAAP02489 173 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SBK2P0C263 348 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 CBR1P16152 277 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 RPS27P42677 84 aaKnown RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SLC15A1P46059 708 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ISL1P61371 349 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 RAB40BQ12829 278 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ENDOGQ14249 297 aaKnown RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 GGTLC2Q14390 218 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 RAB39AQ14964 217 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SMN1Q16637 294 aaKnown RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 PABPC1L2AQ5JQF8 200 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 LINC01590Q5TEZ4 76 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF774Q6NX45 483 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 AHSA2Q719I0 299 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 FAM222BQ8WU58 562 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SNX33Q8WV41 574 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ZNRF4Q8WWF5 429 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ASB17Q8WXJ9 295 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 MYDGFQ969H8 173 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SPTSSAQ969W0 71 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 FBXO17Q96EF6 278 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 DACH2Q96NX9 599 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 WFIKKN1Q96NZ8 548 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 ATF6BQ99941 703 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 OR2H1Q9GZK4 316 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 CCDC90BQ9GZT6 254 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 NPDC1Q9NQX5 325 aaPredicted RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 MRPL22Q9NWU5 206 aaKnown RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 HAO2Q9NYQ3 351 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 EIF3KQ9UBQ5 218 aaKnown RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 GDF2Q9UK05 429 aaPredicted RBP7.39□□□□□ -1.23
TRIM48-201ENST00000417545 GTF2A1LQ9UNN4 478 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SPEF1Q9Y4P9 236 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 SLC25A15Q9Y619 301 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 LHFPL6Q9Y693 200 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 HIVEP3Q5T1R4 2406 aa7.39□□□□□ -1.23
TRIM48-201ENST00000417545 PCNX1Q96RV3 2341 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 WIPF3A6NGB9 483 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 PTGES3LE9PB15 166 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 E9PQ18 207 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 SLC1A7O00341 560 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 MYL12BO14950 172 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 RER1O15258 196 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 DENRO43583 198 aaKnown RBP7.38□□□□□ -1.23
TRIM48-201ENST00000417545 WBP4O75554 376 aaKnown RBP7.38□□□□□ -1.23
TRIM48-201ENST00000417545 SCG5P05408 212 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 KRT8P05787 483 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 CD3EP07766 207 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 OR2T7P0C7T2 308 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 RNF224P0DH78 156 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 GABRB1P18505 474 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
TRIM48-201ENST00000417545 SLC6A9P48067 706 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 NR1H2P55055 460 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 CXCR4P61073 352 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 ACTA2P62736 377 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 GRB2P62993 217 aaKnown RBP7.38□□□□□ -1.23
TRIM48-201ENST00000417545 ACTG2P63267 376 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 EFNB1P98172 346 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 TFF3Q07654 80 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 ECH1Q13011 328 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 BEX5Q5H9J7 111 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 ELFN2Q5R3F8 820 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 RBM48Q5RL73 367 aaKnown RBP7.38□□□□□ -1.23
TRIM48-201ENST00000417545 C6orf141Q5SZD1 244 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF544Q6NX49 715 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 UNQ6126/PRO20091Q6UXV3 157 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 CFAP77Q6ZQR2 320 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 DMRTC2Q8IXT2 367 aaPredicted RBP7.38□□□□□ -1.23
TRIM48-201ENST00000417545 TIGD4Q8IY51 512 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF283Q8N7M2 679 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 YIPF7Q8N8F6 280 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 WDR31Q8NA23 367 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 SLC30A7Q8NEW0 376 aa7.38□□□□□ -1.23
TRIM48-201ENST00000417545 OR4F15Q8NGB8 312 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms