RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SCAND1P57086 179 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 GLO1Q04760 184 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 LRRC37A5PQ49AS3 106 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 KCTD18Q6PI47 426 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 GKN2Q86XP6 184 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 SPERTQ8NA61 448 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 OR4D6Q8NGJ1 314 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 FAM46BQ96A09 425 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 SLC41A2Q96JW4 573 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 MFFQ9GZY8 342 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 TTYH1Q9H313 450 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 CENPMQ9NSP4 180 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 TMEM82A0PJX8 343 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 A8MVM7 634 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 ZNF354AO60765 605 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 IGLV3-19P01714 112 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 ITGB2P05107 769 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 CD2P06729 351 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 HOXD4P09016 255 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 CD38P28907 300 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 ARL4DP49703 201 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 CFHR1Q03591 330 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 LY6G6FQ5SQ64 297 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 ZNF660Q6AZW8 331 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 RTN4RL2Q86UN3 420 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 OR1J2Q8NGS2 313 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 OR52N5Q8NH56 324 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 C12orf10Q9HB07 376 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 VSX1Q9NZR4 365 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-208ENST00000417496 CTSFQ9UBX1 484 aa12.98□□□□□ -0.33
HDAC9-208ENST00000417496 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-208ENST00000417496 LOC107986453A0A1B0GWG9 222 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-208ENST00000417496 LILRA5A6NI73 299 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 RHPN2P1A8MT19 583 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 HMSDA8MTL9 139 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 P2RY10O00398 339 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 CCSO14618 274 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 MT-ATP6P00846 226 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 OPN1LWP04000 364 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 DNASE1L1P49184 302 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 ARRB1P49407 418 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-208ENST00000417496 BEX5Q5H9J7 111 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 LIN54Q6MZP7 749 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 NUP54Q7Z3B4 507 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 OR6M1Q8NGM8 313 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 SEC22AQ96IW7 307 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 EMC6Q9BV81 110 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 MMACHCQ9Y4U1 282 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 DMDP11532 3685 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 TRAV14DV4A0A0A6YYC5 116 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 IGHV1OR15-9A0A0B4J2B8 117 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 IGFBP3P17936 291 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-208ENST00000417496 ACHEP22303 614 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 PMPCAQ10713 525 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 OR7A5Q15622 319 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 GVQW1Q8N7I0 195 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 SMRP1Q8NCR6 262 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 SCARB1Q8WTV0 552 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 CYYR1Q96J86 154 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 SLC6A7Q99884 636 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 DPYSL5Q9BPU6 564 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 COPS7AQ9UBW8 275 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 KLK13Q9UKR3 277 aa12.97□□□□□ -0.33
HDAC9-208ENST00000417496 TMEM269A0A1B0GVZ9 245 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 MS4A18H0YCH9 400 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 EIF4E2O60573 245 aaKnown RBP12.96□□□□□ -0.33
HDAC9-208ENST00000417496 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ATF4P18848 351 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-208ENST00000417496 NUP62P37198 522 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-208ENST00000417496 TAS2R19P59542 299 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ACTBP60709 375 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ACTG1P63261 375 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ZMYND11Q15326 602 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 MS4A18Q3C1V0 323 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ATPAF1Q5TC12 328 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-208ENST00000417496 OR52W1Q6IF63 320 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 TMEM81Q6P7N7 255 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 SLC29A4Q7RTT9 530 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 TSTD1Q8NFU3 115 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 DAZLQ92904 295 aaKnown RBP12.96□□□□□ -0.33
HDAC9-208ENST00000417496 G6PC2Q9NQR9 355 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 MED11Q9P086 117 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 RTTNQ86VV8 2226 aa12.96□□□□□ -0.33
HDAC9-208ENST00000417496 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.34
HDAC9-208ENST00000417496 FADS1O60427 444 aa12.96□□□□□ -0.34
HDAC9-208ENST00000417496 TPPPO94811 219 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms