RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 PRAMEF17Q5VTA0 474 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 FAM220AQ7Z4H9 259 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 NAA40Q86UY6 237 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 ABCA7Q8IZY2 2146 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 CDRT4Q8N9R6 151 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 PHOSPHO1Q8TCT1 267 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 NMNAT3Q96T66 252 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 MAP3K3Q99759 626 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 SEBOXQ9HB31 216 aaPredicted RBP12.48□□□□□ -0.41
CHEK2-210ENST00000416671 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 WDFY3Q8IZQ1 3526 aa12.48□□□□□ -0.41
CHEK2-210ENST00000416671 PCDH15Q96QU1 1955 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 TRBV5-5A0A0J9YX44 114 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 OR2T1O43869 369 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 HLA-AP01891 365 aaKnown RBP12.47□□□□□ -0.41
CHEK2-210ENST00000416671 NR0B2Q15466 257 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 IL34Q6ZMJ4 242 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 PARGQ86W56 976 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 C19orf47Q8N9M1 422 aaKnown RBP12.47□□□□□ -0.41
CHEK2-210ENST00000416671 GPX8Q8TED1 209 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 CCDC74AQ96AQ1 378 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 PIK3IP1Q96FE7 263 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 PTCHD1Q96NR3 888 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 ADAM18Q9Y3Q7 739 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 A0A1B0GX12 115 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 C10orf142B7Z368 130 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 M0QYG6 137 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 OR8G3PP0DMU2 310 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 ABCD3P28288 659 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 RPL4P36578 427 aaKnown RBP12.47□□□□□ -0.41
CHEK2-210ENST00000416671 RBM34P42696 430 aaKnown RBP12.47□□□□□ -0.41
CHEK2-210ENST00000416671 POU3F4P49335 361 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 BTG2P78543 158 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 ZNF684Q5T5D7 378 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 TMEM229BQ8NBD8 167 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 ZNF417Q8TAU3 575 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 SEMA6CQ9H3T2 930 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 DUSP22Q9NRW4 184 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 FRRS1LQ9P0K9 344 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 MPDZO75970 2070 aa12.47□□□□□ -0.41
CHEK2-210ENST00000416671 FAM221BA6H8Z2 402 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 CDC40O60508 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
CHEK2-210ENST00000416671 HTR3BO95264 441 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 NGFRP08138 427 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 CCR5P51681 352 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 RAB38P57729 211 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.41
CHEK2-210ENST00000416671 OR7A5Q15622 319 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 NKAPLQ5M9Q1 402 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 NPEPL1Q8NDH3 523 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 CPNE2Q96FN4 548 aaPredicted RBP12.46□□□□□ -0.41
CHEK2-210ENST00000416671 ZNF285Q96NJ3 590 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 NRIP2Q9BQI9 281 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 ACKR4Q9NPB9 350 aa12.46□□□□□ -0.41
CHEK2-210ENST00000416671 A0A087WV62 115 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 A0A1B0GWA3 101 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 BRINP1O60477 761 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 NDUFS6O75380 124 aaKnown RBP12.46□□□□□ -0.42
CHEK2-210ENST00000416671 IGHV2-70P01814 119 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 PSG6Q00889 435 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 BIVMQ86UB2 503 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 TMEM200AQ86VY9 491 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 BAP18Q8IXM2 172 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 GALNT16Q8N428 558 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 TMEM106AQ96A25 262 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 SMCO4Q9NRQ5 59 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 RCC2Q9P258 522 aaKnown RBP12.46□□□□□ -0.42
CHEK2-210ENST00000416671 THADAQ6YHU6 1953 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.42
CHEK2-210ENST00000416671 CACNA1CQ13936 2221 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 TRBV23-1A0A0A0MS06 115 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 F8VVB4 439 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 F8VWA3 439 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 UPK3AO75631 287 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 IGKV1D-16P01601 117 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 CD74P04233 296 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
CHEK2-210ENST00000416671 EMDP50402 254 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 ZP2Q05996 745 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 FAM53BQ14153 422 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 ARHGAP40Q5TG30 622 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 C15orf54Q8N8G6 183 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 SLC30A7Q8NEW0 376 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 ZPLD1Q8TCW7 415 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 LMX1AQ8TE12 382 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 EDARADDQ8WWZ3 215 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 RBM18Q96H35 190 aaKnown RBP12.45□□□□□ -0.42
CHEK2-210ENST00000416671 ATG5Q9H1Y0 275 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 GHRLQ9UBU3 117 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 WDR87Q6ZQQ6 2873 aa12.45□□□□□ -0.42
CHEK2-210ENST00000416671 IGHV1OR15-9A0A0B4J2B8 117 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms