RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR6A2O95222 327 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 GOT2P00505 430 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 FABP3P05413 133 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANXA4P09525 319 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 LINC00032P0C843 101 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 HSMCR30P0CW71 290 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RRASP10301 218 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPP1P10451 314 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 NCK1P16333 377 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 DPEP1P16444 411 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPX2P18283 190 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 MAGP20916 626 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PSMA1P25786 263 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRDX2P32119 198 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TALDO1P37837 337 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 MMP12P39900 470 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDKN2CP42773 168 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PTGFRP43088 359 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR3A1P47881 315 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 KCNJ3P48549 501 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TTPAP49638 278 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 GNG10P50151 68 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 DAPP51397 102 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 STC1P52823 247 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 DIO3P55073 304 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDKN2DP55273 166 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAG2P55895 527 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 NCS1P62166 190 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SNRPD1P62314 119 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDK3Q00526 305 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ADIGQ0VDE8 80 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 HSPB3Q12988 150 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPR17Q13304 367 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 C18orf21Q32NC0 220 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 GLYR1Q49A26 553 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 KLHL12Q53G59 568 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PYCR3Q53H96 274 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 LRRC73Q5JTD7 316 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC25A30Q5SVS4 291 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ADNP2Q6IQ32 1131 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 BHLHB9Q6PI77 547 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PLET1Q6UQ28 207 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM207Q6UWW9 146 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 BTNL8Q6UX41 500 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CERS6Q6ZMG9 384 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMPRSS11AQ6ZMR5 421 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RTL4Q6ZR62 310 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 Q6ZSR9 355 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 IFNEQ86WN2 208 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CATSPERDQ86XM0 798 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RBM45Q8IUH3 476 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 STHQ8IWL8 128 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC30A8Q8IWU4 369 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF440Q8IYI8 595 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 NPWQ8N729 165 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF614Q8N883 585 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR5T1Q8NG75 326 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR4F6Q8NGB9 312 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR9Q1Q8NGQ5 310 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF675Q8TD23 568 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 UBTD2Q8WUN7 234 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ST8SIA1Q92185 356 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANKRD9Q96BM1 317 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM80Q96HE8 168 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SFXN2Q96NB2 322 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TECTBQ96PL2 329 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TSSK3Q96PN8 268 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 VPS35Q96QK1 796 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 FEVQ99581 238 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SDHCQ99643 169 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 MAPKAP1Q9BPZ7 522 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 APOL2Q9BQE5 337 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 MRPL45Q9BRJ2 306 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ATG101Q9BSB4 218 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 MARVELD1Q9BSK0 173 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 TAPBPLQ9BX59 468 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ROGDIQ9GZN7 287 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SRRQ9GZT4 340 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 C6orf62Q9GZU0 229 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR51V1Q9H2C8 321 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 REEP1Q9H902 201 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RNF121Q9H920 327 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 IL1RL2Q9HB29 575 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RDH14Q9HBH5 336 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 GKN1Q9NS71 199 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RBM22Q9NW64 420 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 MED9Q9NWA0 146 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 DDIT4Q9NX09 232 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RHCGQ9UBD6 479 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 EIF3KQ9UBQ5 218 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 APOBEC3BQ9UH17 382 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CLEC2DQ9UHP7 191 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB23Q9ULC3 237 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RASD1Q9Y272 281 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ATG4BQ9Y4P1 393 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 RIPK3Q9Y572 518 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 FKBP7Q9Y680 259 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 DOCK1Q14185 1865 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PLXNA1Q9UIW2 1896 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms