RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TSC22D1Q15714 1073 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 NCMAPQ5T1S8 102 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 ABLIM2Q6H8Q1 611 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 NHLRC1Q6VVB1 395 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 ZBTB46Q86UZ6 589 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 ACBD7Q8N6N7 88 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 ZNF420Q8TAQ5 688 aaPredicted RBP14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 TMIGD2Q96BF3 282 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 CNN2Q99439 309 aaKnown RBP14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 RBM38Q9H0Z9 239 aaKnown RBP14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 ADGRL4Q9HBW9 690 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 PRSS50Q9UI38 385 aa14.83□□□□□ -0.03
SCAMP4-204ENST00000414057 VPS13CQ709C8 3753 aa14.83□□□□□ -0.04
SCAMP4-204ENST00000414057 SLC22A23A1A5C7 686 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 TRAF3IP2O43734 574 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 AKAP8O43823 692 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 INMTO95050 263 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 PLAUP00749 431 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 PTHP01270 115 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 GYPBP06028 91 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 CLUP10909 449 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 PSMB9P28065 219 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 GTF2A1P52655 376 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 GP2P55259 537 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 PPA1Q15181 289 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 TIMM23BQ5SRD1 257 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 FBXW9Q5XUX1 488 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 CLEC9AQ6UXN8 241 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 GPAT4Q86UL3 456 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 UBE2J2Q8N2K1 259 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 KDM8Q8N371 416 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 OR4F15Q8NGB8 312 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 OR6X1Q8NH79 312 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 FBXW5Q969U6 566 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 APH1AQ96BI3 265 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 ZNF775Q96BV0 537 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 MRPL48Q96GC5 212 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 COG8Q96MW5 612 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 KCNK17Q96T54 332 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 MNTQ99583 582 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 SYT4Q9H2B2 425 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 MRPL33O75394 65 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 TRMUO75648 421 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 LYZL6O75951 148 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 IGHG1P01857 330 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 LCKP06239 509 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 WNT4P56705 351 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 MELKQ14680 651 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 SPHARQ15513 63 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 STK11Q15831 433 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 TIGD6Q17RP2 521 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 LINC01590Q5TEZ4 76 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 EGFL6Q8IUX8 553 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 OR6K6Q8NGW6 343 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 OR52N1Q8NH53 320 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 SLC25A44Q96H78 314 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 BCL7BQ9BQE9 202 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 ISYNA1Q9NPH2 558 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 ZNF701Q9NV72 531 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 PARPBPQ9NWS1 579 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 ERVK13-1Q9NX77 482 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 LSM2Q9Y333 95 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 CEPT1Q9Y6K0 416 aa14.82□□□□□ -0.04
SCAMP4-204ENST00000414057 ZNF716A6NP11 495 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 NOL3O60936 208 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 ADRA2AP08913 450 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 OR2T7P0C7T2 308 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 LIMS3P0CW19 117 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 LIMS4P0CW20 117 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 COX5AP20674 150 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 ETV1P50549 477 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 TMBIM6P55061 237 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 BIDP55957 195 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 HSF2Q03933 536 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 SLC17A1Q14916 467 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 MED22Q15528 200 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 THEM4Q5T1C6 240 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 FOXB2Q5VYV0 432 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 TMPRSS11AQ6ZMR5 421 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 OR6V1Q8N148 313 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 KLHL36Q8N4N3 616 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 OR2T27Q8NH04 317 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 IGFBPL1Q8WX77 278 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 ZMYND19Q96E35 227 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 TRMT61AQ96FX7 289 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 COX4I2Q96KJ9 171 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 RBP7Q96R05 134 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 MRPL13Q9BYD1 178 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 NUAK2Q9H093 628 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 MARCH7Q9H992 704 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 SRA1Q9HD15 236 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 MED29Q9NX70 200 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 RSL24D1Q9UHA3 163 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 B9D1Q9UPM9 204 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 LAMP3Q9UQV4 416 aa14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 CAB39Q9Y376 341 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-204ENST00000414057 DAPL1A0PJW8 107 aa14.8□□□□□ -0.04
SCAMP4-204ENST00000414057 CIB4A0PJX0 185 aa14.8□□□□□ -0.04
SCAMP4-204ENST00000414057 CCDC160A6NGH7 325 aa14.8□□□□□ -0.04
SCAMP4-204ENST00000414057 ZNF726A6NNF4 738 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms