RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NPAS1Q99742 590 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 SPRTNQ9H040 489 aaPredicted RBP8.46□□□□□ -1.06
SNHG3-201ENST00000413987 FN3KQ9H479 309 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 A4GNTQ9UNA3 340 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 YARS2Q9Y2Z4 477 aaKnown RBP8.46□□□□□ -1.06
SNHG3-201ENST00000413987 FANCMQ8IYD8 2048 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 GPR179Q6PRD1 2367 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 DMXL1Q9Y485 3027 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 CELSR3Q9NYQ7 3312 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CEP192Q8TEP8 1941 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 MPTX1A8MV57 137 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 YY2O15391 372 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 OR10H3O60404 316 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SDC3O75056 442 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 F10P00742 488 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CRYGBP07316 175 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 C8GP07360 202 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 HIST1H2AGP0C0S8 130 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 MPC1LP0DKB6 136 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 FGF5P12034 268 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 HIST1H2ADP20671 130 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SDHBP21912 280 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 IMPA1P29218 277 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PPT1P50897 306 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CCR8P51685 355 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ELLP55199 621 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PITPNAQ00169 270 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CRYZQ08257 329 aaKnown RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 GAB1Q13480 694 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 FZD2Q14332 565 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SYT14P1Q58G82 188 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 LIPJQ5W064 366 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SLC22A10Q63ZE4 541 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 B3GNTL1Q67FW5 361 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ASPHD2Q6ICH7 369 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ADNP2Q6IQ32 1131 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SEM1Q6ZVN7 128 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 LINC00471Q8N535 108 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ARIH2OSQ8N7S6 290 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 OR56B4Q8NH76 319 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ZNF480Q8WV37 535 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 TFGQ92734 400 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ATOH1Q92858 354 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SFXN2Q96NB2 322 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 OR2M4Q96R27 311 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 HIST1H2AJQ99878 128 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 GSX1Q9H4S2 264 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 C1GALT1Q9NS00 363 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 RAXQ9Y2V3 346 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 STARD10Q9Y365 291 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 LRP4O75096 1905 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 GABRPO00591 440 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CLDN4O14493 209 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CRYABP02511 175 aaKnown RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ERCC1P07992 297 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SLC35G4P0C7Q5 338 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 NPR2P20594 1047 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 IDSP22304 550 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 UQCRC2P22695 453 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PSMB5P28074 263 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PTGER4P35408 488 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PCBP3P57721 371 aaKnown RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 VSX2P58304 361 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 OR2G6Q5TZ20 316 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 HBMQ6B0K9 141 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 DHRS7BQ6IAN0 325 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 FBXO42Q6P3S6 717 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CD300LDQ6UXZ3 194 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 OAFQ86UD1 273 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 ZNF761Q86XN6 746 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 SHISA5Q8N114 240 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 TOMM5Q8N4H5 51 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM104Q8NE00 496 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 GTF3AQ92664 365 aaKnown RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 PACRGQ96M98 296 aaPredicted RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM74BQ9NUR3 256 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 GOLGA4Q13439 2230 aaKnown RBP8.45□□□□□ -1.06
SNHG3-201ENST00000413987 THADAQ6YHU6 1953 aa8.45□□□□□ -1.06
SNHG3-201ENST00000413987 TRBV4-1A0A0J9YWV2 114 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SPTY2D1-AS1A0A0U1RR47 76 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 M0R296 226 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 PDCD5O14737 125 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 EEF1E1O43324 174 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 NME2P1O60361 137 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 SOX14O95416 240 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 APOC1P02654 83 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 CATP04040 527 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 H1F0P07305 194 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 NMBP08949 121 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 TEAD1P28347 426 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 RPL3P39023 403 aaKnown RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 MTNR1AP48039 350 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 MC2RQ01718 297 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 MEF2AQ02078 507 aaPredicted RBP8.44□□□□□ -1.06
SNHG3-201ENST00000413987 EGR4Q05215 589 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 LPAL2Q16609 132 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 ST3GAL2Q16842 350 aa8.44□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM44Q2T9K0 475 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms