RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 RER1O15258 196 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 DOK2O60496 412 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 E2F6O75461 281 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 TIPRLO75663 272 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 SNAP29O95721 258 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 NGFP01138 241 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 TFP02787 698 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 GAAP10253 952 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 NAT2P11245 290 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 CRABP1P29762 137 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 PPOXP50336 477 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 RPS23P62266 143 aaKnown RBP11.28□□□□□ -0.6
SSB-203ENST00000413002 SLC36A3Q495N2 470 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 CLEC2AQ6UVW9 174 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 IQCF1Q8N6M8 205 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 OR10H5Q8NGA6 315 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 OR51L1Q8NGJ5 315 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 OR9Q1Q8NGQ5 310 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 ABHD4Q8TB40 342 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 FAM168AQ92567 244 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
SSB-203ENST00000413002 POP5Q969H6 163 aaKnown RBP11.28□□□□□ -0.6
SSB-203ENST00000413002 DGCR6LQ9BY27 220 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 REV1Q9UBZ9 1251 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 POLR1DQ9Y2S0 133 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
SSB-203ENST00000413002 CSPG4Q6UVK1 2322 aa11.27□□□□□ -0.6
SSB-203ENST00000413002 SGCEO43556 437 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 SYNGR3O43761 229 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 IDH3BO43837 385 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 HLA-DQA2P01906 255 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 DBHP09172 617 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 POU1F1P28069 291 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 MPV17P39210 176 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 RAD52P43351 418 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 HTR5AP47898 357 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 RASSF2P50749 326 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 CCDC92Q53HC0 331 aaPredicted RBP11.27□□□□□ -0.61
SSB-203ENST00000413002 TMEM255AQ5JRV8 349 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 ZNF362Q5T0B9 420 aaPredicted RBP11.27□□□□□ -0.61
SSB-203ENST00000413002 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 DNM1P34Q6PK57 102 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 RFPL4BQ6ZWI9 263 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
SSB-203ENST00000413002 LINC00346Q8IVM7 164 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 SLC37A3Q8NCC5 494 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 SYNPRQ8TBG9 265 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 DDOQ99489 341 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 NTN4Q9HB63 628 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 PLEK2Q9NYT0 353 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 TAAR3PQ9P1P4 343 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 EIF3KQ9UBQ5 218 aaKnown RBP11.27□□□□□ -0.61
SSB-203ENST00000413002 FKBP7Q9Y680 259 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 TLN2Q9Y4G6 2542 aa11.27□□□□□ -0.61
SSB-203ENST00000413002 TVP23AA6NH52 213 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 H3BN98 237 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 M0R233 179 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 ATP5HO75947 161 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 GYPBP06028 91 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 GSTM3P21266 225 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 PCSK6P29122 969 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 RPS27P42677 84 aaKnown RBP11.26□□□□□ -0.61
SSB-203ENST00000413002 LSM6P62312 80 aaKnown RBP11.26□□□□□ -0.61
SSB-203ENST00000413002 TEKQ02763 1124 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 AQP6Q13520 282 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 CRMP1Q14194 572 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 NKPD1Q17RQ9 610 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 C1orf146Q5VVC0 180 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 RPL13AP3Q6NVV1 102 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 SYT9Q86SS6 491 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 ZBTB46Q86UZ6 589 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 LNX2Q8N448 690 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 PAPD5Q8NDF8 572 aaKnown RBP11.26□□□□□ -0.61
SSB-203ENST00000413002 PROKR2Q8NFJ6 384 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 SLC26A10Q8NG04 563 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 SLC25A40Q8TBP6 338 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 C4orf45Q96LM5 186 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 BCL2L14Q9BZR8 327 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 POFUT1Q9H488 388 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 MED20Q9H944 212 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 MRPL22Q9NWU5 206 aaKnown RBP11.26□□□□□ -0.61
SSB-203ENST00000413002 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 DNAJB9Q9UBS3 223 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 GRIP1Q9Y3R0 1128 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 LHFPL6Q9Y693 200 aa11.26□□□□□ -0.61
SSB-203ENST00000413002 A0A096LNT2 108 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 HPXP02790 462 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 CLUP10909 449 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 DAOP14920 347 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 ZNF250P15622 560 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms