RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 HCAR3P49019 387 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CDKN2DP55273 166 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 GFERP55789 205 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 MXD1Q05195 221 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 TCP10Q12799 353 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 PDZK1IP1Q13113 114 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 KRTAP25-1Q3LHN0 102 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 FILIP1LQ4L180 1135 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 AVPI1Q5T686 147 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 AMMECR1LQ6DCA0 310 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 ZNF470Q6ECI4 717 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 PRSS54Q6PEW0 395 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 TMEM25Q86YD3 366 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 NUDCD3Q8IVD9 361 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 LINC00469Q8N7U9 141 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 TRMT10AQ8TBZ6 339 aaKnown RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 MAGEE2Q8TD90 523 aaPredicted RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CTNNBL1Q8WYA6 563 aaPredicted RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 TTC25Q96NG3 672 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 GPR82Q96P67 336 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 HSD17B10Q99714 261 aaKnown RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 PARP12Q9H0J9 701 aaKnown RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 HYOU1Q9Y4L1 999 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 AMMECR1Q9Y4X0 333 aaPredicted RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGKV1D-43A0A0B4J1Z2 117 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 A0A0B4J2A0 478 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 GABRR3A8MPY1 467 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 NDUFC2-KCTD14E9PQ53 114 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 MED7O43513 233 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 DPM1O60762 260 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 FGF1P05230 155 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CTSLP07711 333 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CGB3P0DN86 165 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TNNI3P19429 210 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 HTR2AP28223 471 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 RPL13AP40429 203 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CAMLGP49069 296 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 DUSP3P51452 185 aaPredicted RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 UBE2NP61088 152 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 ZNF141Q15928 474 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 DPYSL2Q16555 572 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 PGGHGQ32M88 737 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 KRTAP21-1Q3LI58 79 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SP6Q3SY56 376 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 LUZP6Q538Z0 58 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SLC10A5Q5PT55 438 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CCNJQ5T5M9 372 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CPTPQ5TA50 214 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 RBM43Q6ZSC3 357 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 DAZ4Q86SG3 579 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 ZNF713Q8N859 430 aaPredicted RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 ANKFN1Q8N957 763 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 OR11H7Q8NGC8 314 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 OR10R2Q8NGX6 335 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 RNASE11Q8TAA1 199 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TRIM44Q96DX7 344 aaPredicted RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 HSFY1Q96LI6 401 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 FAM111AQ96PZ2 611 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 MTMR9Q96QG7 549 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 PANX2Q96RD6 677 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 OMDQ99983 421 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SAMD10Q9BYL1 202 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 HSD3B7Q9H2F3 369 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 PPA2Q9H2U2 334 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 DUSP21Q9H596 190 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 CWH43Q9H720 699 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 DAZ1Q9NQZ3 744 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 FAM49BQ9NUQ9 324 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SUN2Q9UH99 717 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 SHPKQ9UHJ6 478 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 YARS2Q9Y2Z4 477 aaKnown RBP0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TMED5Q9Y3A6 229 aa0.02□□□□□ -2.41
RNU2-55P-201ENST00000411146 TRAV19A0A0A6YYK7 116 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 METTL21EPA6NDL7 271 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 PRAMEF26H0Y7S4 382 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 CLDN34H7C241 214 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 POLR2DO15514 142 aaKnown RBP0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 HSP90AA1P07900 732 aaKnown RBP0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 UQCRFS1P1P0C7P4 283 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 CALM1P0DP23 149 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 CALM2P0DP24 149 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 CALM3P0DP25 149 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 CD37P11049 281 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 RAB3BP20337 219 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 POLR2IP36954 125 aaKnown RBP0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 MPV17P39210 176 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 EPS15P42566 896 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 ACOT2P49753 483 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 RGS4P49798 205 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 UGT2B15P54855 530 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 RPL23P62829 140 aaKnown RBP0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 ZNF660Q6AZW8 331 aaPredicted RBP0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 OR4F3Q6IEY1 312 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 DEGS2Q6QHC5 323 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 FAM131AQ6UXB0 335 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 MFSD9Q8NBP5 474 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 C20orf166-AS1Q96NR2 134 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 RSG1Q9BU20 258 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 ZNF442Q9H7R0 627 aa0.01□□□□□ -2.41
RNU2-55P-201ENST00000411146 POLE4Q9NR33 117 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms