RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 TWIST2Q8WVJ9 160 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ADTRPQ96IZ2 230 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 PGLYRP3Q96LB9 341 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MUS81Q96NY9 551 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 OR6C1Q96RD1 312 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 P2RX4Q99571 388 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MECRQ9BV79 373 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SPATC1LQ9H0A9 340 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SEMA6CQ9H3T2 930 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 BANF2Q9H503 90 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SYNPO2LQ9H987 977 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 LPAR2Q9HBW0 351 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 DAPP1Q9UN19 280 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 INO80Q9ULG1 1556 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 RTEL1-TNFRSF6BF6WH68 1400 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 A6NIN4 97 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 PPIAL4DF5H284 164 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 DVL1O14640 695 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CST1P01037 141 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MMP1P03956 469 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SERPINE1P05121 402 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ICAM1P05362 532 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CT45A10P0DMU9 189 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 FUT3P21217 361 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 EMX1Q04741 257 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SEMA3BQ13214 749 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CRB2Q5IJ48 1285 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 PABPC1L2AQ5JQF8 200 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SIRPB2Q5JXA9 342 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 C1orf195Q5TG92 126 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CD276Q5ZPR3 534 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 SHISA2Q6UWI4 295 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 Q6ZSR9 355 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 C17orf64Q86WR6 236 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ZNF444Q8N0Y2 327 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ZDHHC16Q969W1 377 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MRPL24Q96A35 216 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 TRIB3Q96RU7 358 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MARVELD1Q9BSK0 173 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 TMEM126AQ9H061 195 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MED9Q9NWA0 146 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 NOS1P29475 1434 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 C2orf72A6NCS6 295 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 TMEM150CB9EJG8 249 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 BMPR1BO00238 502 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 FGF19O95750 216 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ZNF682O95780 498 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CRYGCP07315 174 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ELK1P19419 428 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 GLRXP35754 106 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 PIGAP37287 484 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CD96P40200 585 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 GPX6P59796 221 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CSNK1G2P78368 415 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 IFITM2Q01629 132 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 TNXAQ16473 311 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 HLA-BQ31612 363 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 LHX8Q68G74 356 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 BHLHA15Q7RTS1 189 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 PNKDQ8N490 385 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 CSNK1A1LQ8N752 337 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 LRRC52Q8N7C0 313 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ZNF564Q8TBZ8 553 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 ST8SIA1Q92185 356 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 FAAP24Q9BTP7 215 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 WNT16Q9UBV4 365 aa4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 MN1Q10571 1320 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-204ENST00000410054 RGS12O14924 1447 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 KLF18A0A0U1RQI7 1052 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 UMAD1C9J7I0 102 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 PAPLNO95428 1278 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 CFHP08603 1231 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 HIST1H1CP16403 213 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 CYCSP99999 105 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 IRF3Q14653 427 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 CCSMST1Q4G0I0 132 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 FAM162BQ5T6X4 162 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 ZNF66Q6ZN08 573 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 CCDC71LQ8N9Z2 235 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 OR2Z1Q8NG97 314 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 OR4M1Q8NGD0 313 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 OR5AP2Q8NGF4 316 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 TLCD1Q96CP7 247 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 DEFB118Q96PH6 123 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 S1PR3Q99500 378 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 COMMD5Q9GZQ3 224 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 TMEM59LQ9UK28 342 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 NRXN1Q9ULB1 1477 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 ABCA9Q8IUA7 1624 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 A0A0U1RRA0 63 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 NPIPB13A6NJU9 1138 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 NPIPB4C9JG80 1138 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 ANKRD63C9JTQ0 380 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 FTCDNL1E5RQL4 147 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 DCTN6O00399 190 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 NRP1O14786 923 aa4.78□□□□□ -1.64
R3HDM1-204ENST00000410054 HRO43593 1189 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms