RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR6Q1Q8NGQ2 317 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 OR2AJ1Q8NGZ0 328 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 OR5AK2Q8NH90 309 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 OR14A2Q96R54 314 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 C6orf62Q9GZU0 229 aaPredicted RBP12.4□□□□□ -0.42
GPNMB-203ENST00000409458 PNRC2Q9NPJ4 139 aaKnown RBP12.4□□□□□ -0.42
GPNMB-203ENST00000409458 PLSCR2Q9NRY7 297 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 RAXQ9Y2V3 346 aa12.4□□□□□ -0.42
GPNMB-203ENST00000409458 SLC22A20A6NK97 555 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 CASKO14936 926 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 RER1O15258 196 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 MRPL33O75394 65 aaKnown RBP12.39□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF254O75437 659 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 H2BFMP0C1H6 154 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 RORCP51449 518 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 LSM6P62312 80 aaKnown RBP12.39□□□□□ -0.43
GPNMB-203ENST00000409458 ODF4Q2M2E3 257 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 ZMAT1Q5H9K5 638 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 DEGS2Q6QHC5 323 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 IL17RDQ8NFM7 739 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 EXTL1Q92935 676 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 ABHD17AQ96GS6 310 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 KCNS3Q9BQ31 491 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 SLCO5A1Q9H2Y9 848 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 MMP27Q9H306 513 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 RNF122Q9H9V4 155 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 GPR35Q9HC97 309 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 B3GAT2Q9NPZ5 323 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 LUZP4Q9P127 313 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 SLC22A13Q9Y226 551 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 B3GNT3Q9Y2A9 372 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 TP53TG5Q9Y2B4 290 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 R4GMQ9 66 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 A3GALT2U3KPV4 340 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 CACNA1CQ13936 2221 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 MGAQ8IWI9 3026 aa12.39□□□□□ -0.43
GPNMB-203ENST00000409458 A0A1W2PPK0 400 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 TMEM212A6NML5 194 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 NCR1O76036 304 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 IGHV3-9P01782 118 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 GUCA1AP43080 201 aaPredicted RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 MAGEB1P43366 347 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 MTNR1BP49286 362 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 MRPS34P82930 218 aaKnown RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 MOGQ16653 247 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 CEACAM16Q2WEN9 425 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 RIPPLY2Q5TAB7 128 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 CATSPERDQ86XM0 798 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 MCEMP1Q8IX19 187 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 RDH10Q8IZV5 341 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 LRRC18Q8N456 261 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 CPT1CQ8TCG5 803 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 PPP1R14AQ96A00 147 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 TMEM38BQ9NVV0 291 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 GTF2A1LQ9UNN4 478 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 EMC9Q9Y3B6 208 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF175Q9Y473 711 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 CEP295Q9C0D2 2601 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ACOD1A6NK06 481 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF879B4DU55 563 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF878C9JN71 531 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 GATBO75879 557 aaKnown RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 YES1P07947 543 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ADRB1P08588 477 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 UCHL1P09936 223 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 MYL9P24844 172 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 CCR9P51686 369 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 BMXP51813 675 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 TMPRSS3P57727 454 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 PLEKHN1Q494U1 663 aaPredicted RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 PAMR1Q6UXH9 720 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 UNQ9370/PRO34162Q6UXP9 181 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 NUFIP2Q7Z417 695 aaKnown RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ADGRE4PQ86SQ3 457 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 NR2C2APQ86WQ0 139 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ZNF676Q8N7Q3 588 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 TEX19Q8NA77 164 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 OR51A4Q8NGJ6 313 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 OR10AC1Q8NH08 325 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 COMMD4Q9H0A8 199 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 SMURF1Q9HCE7 757 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 CLCF1Q9UBD9 225 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 PLEKHB1Q9UF11 243 aaPredicted RBP12.38□□□□□ -0.43
GPNMB-203ENST00000409458 ACACAQ13085 2346 aa12.38□□□□□ -0.43
GPNMB-203ENST00000409458 TRBV5-5A0A0J9YX44 114 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 LOC110117498-PIK3R3F6TDL0 507 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 H3BSH0 61 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 PIN1P1O15428 100 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 FCGR2AP12318 317 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 BMP4P12644 408 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 B4GALT1P15291 398 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 NPR2P20594 1047 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 ID4P47928 161 aa12.37□□□□□ -0.43
GPNMB-203ENST00000409458 RPUSD3Q6P087 351 aaKnown RBP12.37□□□□□ -0.43
GPNMB-203ENST00000409458 LINC00299Q6ZSB3 139 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms