RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CXCR4P61073 352 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 PSG4Q00888 419 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 GSG1Q2KHT4 349 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 PABPC1L2AQ5JQF8 200 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 TIMM23BQ5SRD1 257 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC18B1Q6NT16 456 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 AHSA2Q719I0 299 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 SSX6Q7RTT6 188 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 OR2AJ1Q8NGZ0 328 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 MUCL1Q96DR8 90 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 WNT5BQ9H1J7 359 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 KCNN2Q9H2S1 579 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 CYB5R1Q9UHQ9 305 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 C12orf71A8MTZ7 269 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 HRGP04196 525 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 SMIM18P0DKX4 95 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 LSM6P62312 80 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 AQP6Q13520 282 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC36A2Q495M3 483 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 CCDC92Q53HC0 331 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 SEZ6L2Q6UXD5 910 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 CDC20BQ86Y33 519 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 C17orf78Q8N4C9 275 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 OR52I1Q8NGK6 324 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 OR10S1Q8NGN2 331 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 GGHQ92820 318 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 OR2H1Q9GZK4 316 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 MARCH7Q9H992 704 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 CENPMQ9NSP4 180 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 PAK1IP1Q9NWT1 392 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 B3GNT2Q9NY97 397 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 PLEK2Q9NYT0 353 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 RPL36Q9Y3U8 105 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 SPTAN1Q13813 2472 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-204ENST00000409323 ARPC4-TTLL3A0A0A6YYG9 625 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 A0A1W2PQL4 384 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 DOK2O60496 412 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 UBL3O95164 117 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 RAB36O95755 333 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 DBHP09172 617 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 CCNOP22674 350 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 BLVRAP53004 296 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 SPOCK1Q08629 439 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 PLEKHG7Q6ZR37 379 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF540Q8NDQ6 660 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 NANOS1Q8WY41 292 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 ABHD6Q9BV23 337 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 HAO2Q9NYQ3 351 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 LAMP5Q9UJQ1 280 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 AMDHD2Q9Y303 409 aa12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 HELZ2Q9BYK8 2649 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-204ENST00000409323 CADP27708 2225 aa12.27□□□□□ -0.45
CHRNA1-204ENST00000409323 SNTNA6NMZ2 147 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 SGCEO43556 437 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 NRN1LQ496H8 165 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 RBM48Q5RL73 367 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 TMEM53Q6P2H8 277 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 LRRN1Q6UXK5 716 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 MEX3BQ6ZN04 569 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 VASH1Q7L8A9 365 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 LHFPL3Q86UP9 236 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 OTOSQ8NHW6 89 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 ST7LQ8TDW4 575 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 HSD17B8Q92506 261 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 ZNF75AQ96N20 296 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 OR51B6Q9H340 312 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 NDRG3Q9UGV2 375 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 PSORS1C1Q9UIG5 152 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 TIMM10BQ9Y5J6 103 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 FASNP49327 2511 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 LRRK2Q5S007 2527 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 IGHV1-18A0A0C4DH31 117 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 TMCC2O75069 709 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 TFAP2AP05549 437 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 CCDC159P0C7I6 412 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 CECR9P0C854 216 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 C21orf33P30042 268 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 KIR2DL3P43628 341 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 SLC15A1P46059 708 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 HTR5AP47898 357 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 SORDQ00796 357 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 GALK2Q01415 458 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 ZNF85Q03923 595 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 SCRN3Q0VDG4 424 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 ST3GAL4Q11206 333 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 PCK2Q16822 640 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 PAQR4Q8N4S7 273 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 GJC3Q8NFK1 279 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 SLAMF6Q96DU3 332 aa12.26□□□□□ -0.45
CHRNA1-204ENST00000409323 MRPS26Q9BYN8 205 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms