RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 DBX1A6NMT0 343 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 SHC1P29353 583 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 BIDP55957 195 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 UBE2IP63279 158 aaKnown RBP11.17□□□□□ -0.62
SHANK2-203ENST00000409161 WWTR1Q9GZV5 400 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 ACOXLQ9NUZ1 547 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 FANCMQ8IYD8 2048 aa11.17□□□□□ -0.62
SHANK2-203ENST00000409161 TPOP07202 933 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 APEX1P27695 318 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 USP53Q70EK8 1073 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 HLA-CQ95604 372 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 UTP23Q9BRU9 249 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 WDR61Q9GZS3 305 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 RPL12P30050 165 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 CLDN17P56750 224 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 YPEL5P62699 121 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 BCO1Q9HAY6 547 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 C7orf72A4D263 438 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 BCL2L11O43521 198 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 GCSHP23434 173 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 GLIPR1L1Q6UWM5 242 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 AAED1Q7RTV5 226 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 TMEM102Q8N9M5 508 aaPredicted RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 SLC38A9Q8NBW4 561 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 CMTM3Q96MX0 182 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 FAM24AA6NFZ4 105 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 SH2D1BO14796 132 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 YKT6O15498 198 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ABOP16442 354 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ADRA1AP35348 466 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ZNF718Q3SXZ3 478 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 TMEM130Q8N3G9 435 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 OR10P1Q8NGE3 313 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 OR5AP2Q8NGF4 316 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 RTL8AQ9BWD3 113 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 LRP6O75581 1613 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 EDN1P05305 212 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ZNF26P17031 533 aaPredicted RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 LEXMQ3ZCV2 418 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 LHX4Q969G2 390 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 OR2M5A3KFT3 312 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ZNF814B7Z6K7 855 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 M0QYG6 137 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ATXN1LP0C7T5 689 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 FCGR2CP31995 323 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 KCNE4Q8WWG9 221 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 SMIM19Q96E16 107 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 LCORQ96JN0 433 aaPredicted RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 CHST8Q9H2A9 424 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 LRRC3CA6NJW4 275 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 CCL14Q16627 93 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ABLIM2Q6H8Q1 611 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 WDR73Q6P4I2 378 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ANGPTL5Q86XS5 388 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 EDAQ92838 391 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
SHANK2-203ENST00000409161 SLCO3A1Q9UIG8 710 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 DOCK7Q96N67 2140 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 KMT2EQ8IZD2 1858 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ARNTP27540 789 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 CLDN12P56749 244 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 CARD18P57730 90 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 ABI3BPQ7Z7G0 1075 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 GABARAPL3Q9BY60 117 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 LYRM4Q9HD34 91 aa11.16□□□□□ -0.62
SHANK2-203ENST00000409161 GALR2O43603 387 aaPredicted RBP11.15□□□□□ -0.62
SHANK2-203ENST00000409161 CD37P11049 281 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 FABP9Q0Z7S8 132 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 ADIPOR1Q96A54 375 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 AKR1E2Q96JD6 320 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 PISDQ9UG56 409 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 SIGLEC1Q9BZZ2 1709 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 LIMS3P0CW19 117 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 LIMS4P0CW20 117 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 GABRB1P18505 474 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 TCTEX1D1Q8N7M0 179 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 OR10X1Q8NGY0 326 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 ASIC5Q9NY37 505 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 HCRTO43612 131 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 OR5I1Q13606 314 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 TRNP1Q6NT89 227 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 PLPP7Q8NBV4 271 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 SLC39A7Q92504 469 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 C3orf30Q96M34 536 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 C16orf70Q9BSU1 422 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 MYLKQ15746 1914 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 DRGXA6NNA5 263 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 VAMP5O95183 116 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 UTS2O95399 124 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 APOBEC1P41238 236 aaKnown RBP11.15□□□□□ -0.62
SHANK2-203ENST00000409161 SYT14P1Q58G82 188 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 GDF7Q7Z4P5 450 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 GALNT16Q8N428 558 aa11.15□□□□□ -0.62
SHANK2-203ENST00000409161 S1PR3Q99500 378 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms