RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GAS6Q14393 721 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
HERC3-203ENST00000407637 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 SLC39A5Q6ZMH5 540 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 ZNF793Q6ZN11 406 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
HERC3-203ENST00000407637 CDS1Q92903 461 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 ZNF764Q96H86 408 aaPredicted RBP11.56□□□□□ -0.56
HERC3-203ENST00000407637 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
HERC3-203ENST00000407637 WDR92Q96MX6 357 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 DDA1Q9BW61 102 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 LMAN2LQ9H0V9 348 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 OPN3Q9H1Y3 402 aaPredicted RBP11.56□□□□□ -0.56
HERC3-203ENST00000407637 FRRS1LQ9P0K9 344 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 ZNF346Q9UL40 294 aaKnown RBP11.56□□□□□ -0.56
HERC3-203ENST00000407637 MED31Q9Y3C7 131 aa11.56□□□□□ -0.56
HERC3-203ENST00000407637 A0A087WV62 115 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 TRBV5-5A0A0J9YX44 114 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 EIF1AYO14602 144 aaKnown RBP11.55□□□□□ -0.56
HERC3-203ENST00000407637 CXCL1P09341 107 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 CKBP12277 381 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
HERC3-203ENST00000407637 SLC6A6P31641 620 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 EIF1AXP47813 144 aaKnown RBP11.55□□□□□ -0.56
HERC3-203ENST00000407637 RAB11BQ15907 218 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 PRSS54Q6PEW0 395 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 C5orf24Q7Z6I8 188 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 OR5R1Q8NH85 324 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 RAB24Q969Q5 203 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 SLC25A36Q96CQ1 311 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 MUCL1Q96DR8 90 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 SLC35A4Q96G79 324 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 AQP10Q96PS8 301 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 RHBGQ9H310 441 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 PRR13Q9NZ81 148 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 VSX1Q9NZR4 365 aaPredicted RBP11.55□□□□□ -0.56
HERC3-203ENST00000407637 LOC100289279A0A1B0GTE1 492 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 ZNF724A8MTY0 619 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 ZNF727A8MUV8 499 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 F13BP05160 661 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 CTSAP10619 480 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 PSMB5P28074 263 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 CD200P41217 278 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 DIO1P49895 249 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 RAB1AP62820 205 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 TMCO2Q7Z6W1 182 aaPredicted RBP11.55□□□□□ -0.56
HERC3-203ENST00000407637 ADAMTS15Q8TE58 950 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 Q8WTZ3 238 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 SCRT1Q9BWW7 348 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 OR52A5Q9H2C5 316 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 FAM86C1Q9NVL1 165 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 KLHDC2Q9Y2U9 406 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 PPIL1Q9Y3C6 166 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 WDR45Q9Y484 360 aa11.55□□□□□ -0.56
HERC3-203ENST00000407637 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
HERC3-203ENST00000407637 TRBV23OR9-2A0A075B6M9 112 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 A0A0A6YYD5 115 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 DUS4LO95620 317 aaKnown RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 HKR1P10072 659 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 CX3CR1P49238 355 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 SNRPD1P62314 119 aaKnown RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 ZNF616Q08AN1 781 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 TOMM34Q15785 309 aaPredicted RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 SLC16A11Q8NCK7 471 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 ZNF417Q8TAU3 575 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 FAM174AQ8TBP5 190 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 ZNF689Q96CS4 500 aaPredicted RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 PRAP1Q96NZ9 151 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 NMNAT3Q96T66 252 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 CDC6Q99741 560 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 PRRT1Q99946 306 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 C6orf106Q9H6K1 298 aaPredicted RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 IER3IP1Q9Y5U9 82 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 HS3ST3B1Q9Y662 390 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 URGCP-MRPS24S4R325 110 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 SCN2AQ99250 2005 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 NPIPA5A0A0B4J1W7 369 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 NPIPA7E9PJI5 369 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 CXCL11O14625 94 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 RAMP1O60894 148 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 LEFTY1O75610 366 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 STK17BO94768 372 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 PTBP3O95758 552 aaKnown RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 NPIPA8P0DM63 369 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 TACR3P29371 465 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 GJA4P35212 333 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 UBE2V2Q15819 145 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 RNASE10Q5GAN6 216 aaKnown RBP11.54□□□□□ -0.56
HERC3-203ENST00000407637 HIST2H3PS2Q5TEC6 136 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 FAM220AQ7Z4H9 259 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 C17orf64Q86WR6 236 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 ZNF584Q8IVC4 421 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 AIF1LQ9BQI0 150 aa11.54□□□□□ -0.56
HERC3-203ENST00000407637 FBXO7Q9Y3I1 522 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms