RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 UNC119BA6NIH7 251 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 ZSCAN5BA6NJL1 495 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 B4DSR2 109 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 SLC16A7O60669 478 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 IGHV1-46P01743 117 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 MT-ND5P03915 603 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 HSD17B1P14061 328 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 THBS2P35442 1172 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 LMO4P61968 165 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 GNGT1P63211 74 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 MVKQ03426 396 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 KRT72Q14CN4 511 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 GPR139Q6DWJ6 353 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 UNQ6126/PRO20091Q6UXV3 157 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 CDRT15Q96T59 188 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 SAP30LQ9HAJ7 183 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 COA3Q9Y2R0 106 aaPredicted RBP16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 WNK2Q9Y3S1 2297 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 DOK2O60496 412 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 GAAP10253 952 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 CDKN2AP42771 156 aaKnown RBP16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 DVL1P1P54792 670 aaPredicted RBP16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 KRTAP24-1Q3LI83 254 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 ZER1Q7Z7L7 766 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 PGAM4Q8N0Y7 254 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 NUAK2Q9H093 628 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 POFUT1Q9H488 388 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 VSX1Q9NZR4 365 aaPredicted RBP16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 TAGLN3Q9UI15 199 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 MAGEL2Q9UJ55 1249 aa16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 NDRG4Q9ULP0 352 aaKnown RBP16.4■□□□□ 0.22
SMARCB1-204ENST00000407422 PLSCR5A0PG75 271 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 ARPC2O15144 300 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 SGCEO43556 437 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 ABHD16AO95870 558 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 GPANK1O95872 356 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 ITGA2P17301 1181 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 HTR5AP47898 357 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 SPIBQ01892 262 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 SCRN3Q0VDG4 424 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 DBPQ10586 325 aaPredicted RBP16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 HNRNPA0Q13151 305 aaKnown RBP16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 SPRNQ5BIV9 151 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 SAMD4BQ5PRF9 694 aaKnown RBP16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 DPY19L2P2Q6ZN68 376 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 RINLQ6ZS11 566 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 VASH1Q7L8A9 365 aaPredicted RBP16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 PIGWQ7Z7B1 504 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 GLB1L2Q8IW92 636 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 SLC7A6Q92536 515 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 TSSK2Q96PF2 358 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 ELOVL3Q9HB03 270 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 ASH2LQ9UBL3 628 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 KLHL21Q9UJP4 597 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 TANC2Q9HCD6 1990 aa16.39■□□□□ 0.21
SMARCB1-204ENST00000407422 KHDRBS3O75525 346 aaKnown RBP16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 GADD45GO95257 159 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 PPP1R3DO95685 299 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 TFP02787 698 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 COX5BP10606 129 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 ARHGDIAP52565 204 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 PSG7Q13046 419 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 SMARCD3Q6STE5 483 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 C1orf174Q8IYL3 243 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 LRRC37BQ96QE4 947 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 WACQ9BTA9 647 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 MSL2Q9HCI7 577 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 KRCC1Q9NPI7 259 aaPredicted RBP16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 HIF1ANQ9NWT6 349 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 ARL2BPQ9Y2Y0 163 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 ARHGAP32A7KAX9 2087 aa16.38■□□□□ 0.21
SMARCB1-204ENST00000407422 DCTN6O00399 190 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 TXNDC12O95881 172 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 MSMBP08118 114 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 TEKQ02763 1124 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 AQP6Q13520 282 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 HFEQ30201 348 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 FAM209AQ5JX71 171 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 ARL9Q6T311 187 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 ADCK1Q86TW2 530 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 GLCCI1Q86VQ1 547 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 TMEM186Q96B77 213 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 NSMCE2Q96MF7 247 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 PLEK2Q9NYT0 353 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 GRIP1Q9Y3R0 1128 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 WIPI2Q9Y4P8 454 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 ANK2Q01484 3957 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 DYSFO75923 2080 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 H3BSA7 217 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 SRP14P37108 136 aaKnown RBP16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 RBMXP38159 391 aaKnown RBP16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 RPS6KA3P51812 740 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 SMIM11AP58511 58 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 LSM6P62312 80 aaKnown RBP16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 CCDC92Q53HC0 331 aaPredicted RBP16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 DEFB107AQ8IZN7 70 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 FANK1Q8TC84 345 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 CCL17Q92583 94 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 ERMAPQ96PL5 475 aaPredicted RBP16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 CYSLTR2Q9NS75 346 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms