RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PIAS4Q8N2W9 510 aaPredicted RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 FAM71CQ8NEG0 241 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 FAM83FQ8NEG4 500 aaPredicted RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 OR2M7Q8NG81 312 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ZFAND2BQ8WV99 257 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 OPALINQ96PE5 141 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 POLEQ07864 2286 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 LOC101059948A0A1B0GTJ6 334 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 TO15178 435 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 LRP3O75074 770 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 GPX5O75715 221 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 AMY2AP04746 511 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CEACAM1P13688 526 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 MTNR1BP49286 362 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SLC17A1Q14916 467 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CDK5R1Q15078 307 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CEBPEQ15744 281 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 TMEM81Q6P7N7 255 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CCBE1Q6UXH8 406 aaPredicted RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 PPP1R32Q7Z5V6 425 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 LAX1Q8IWV1 398 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CCDC54Q8NEL0 328 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 OR51D1Q8NGF3 324 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 OR6Q1Q8NGQ2 317 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SORCS2Q96PQ0 1159 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 MAN2C1Q9NTJ4 1040 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 REV1Q9UBZ9 1251 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CGGBP1Q9UFW8 167 aaPredicted RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 GPR160Q9UJ42 338 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ICAM5Q9UMF0 924 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 C5orf49A4QMS7 147 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 LIPT2A6NK58 231 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 TRAPPC2LH3BP13 241 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 PAHP00439 452 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 SP1P08047 785 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 HTR2CP28335 458 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 PCSK6P29122 969 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 RIPPLY1Q0D2K3 151 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 ZNF181Q2M3W8 571 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 PCGF3Q3KNV8 242 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 GLYATL3Q5SZD4 288 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 LRRC28Q86X40 367 aaPredicted RBP8.15□□□□□ -1.1
LIG4-202ENST00000405925 OR2G2Q8NGZ5 317 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 GPR84Q9NQS5 396 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 PIGLQ9Y2B2 252 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 CEP350Q5VT06 3117 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 SLC22A23A1A5C7 686 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 C17orf51A8MQB3 221 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 SCGNO76038 276 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 ACHEP22303 614 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 PRKACBP22694 351 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 ZNF93P35789 620 aaPredicted RBP8.15□□□□□ -1.1
LIG4-202ENST00000405925 SLC25A1P53007 311 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 CD83Q01151 205 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 THOC7Q6I9Y2 204 aaKnown RBP8.15□□□□□ -1.1
LIG4-202ENST00000405925 WDR88Q6ZMY6 472 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 OR5AS1Q8N127 324 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 APCDD1LQ8NCL9 501 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 CSNK2A3Q8NEV1 391 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 SMIM19Q96E16 107 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 LRFN3Q9BTN0 628 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 CCDC32Q9BV29 185 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 METTL8Q9H825 291 aaKnown RBP8.15□□□□□ -1.1
LIG4-202ENST00000405925 NTMQ9P121 344 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 CHST2Q9Y4C5 530 aa8.15□□□□□ -1.1
LIG4-202ENST00000405925 IGHV3-64DA0A0J9YX35 117 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 ISPDA4D126 451 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 H3BUI4 141 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 SRMP19623 302 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 BMP5P22003 454 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 CD40LGP29965 261 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 TGFBR1P36897 503 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 RPS19P39019 145 aaKnown RBP8.15□□□□□ -1.11
LIG4-202ENST00000405925 EGR3Q06889 387 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 ETFDHQ16134 617 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 CCDC58Q4VC31 144 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 AADACL4Q5VUY2 407 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 TMEM205Q6UW68 189 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 KCTD9Q7L273 389 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 FOXRED2Q8IWF2 684 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 FAM109AQ8N4B1 249 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 PRR18Q8N4B5 295 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 DNAAF1Q8NEP3 725 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 PHYHIPQ92561 330 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 SPACA5Q96QH8 159 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 CLCC1Q96S66 551 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 MED18Q9BUE0 208 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 TMEM59Q9BXS4 323 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 TAS2R8Q9NYW2 309 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 OR14J1Q9UGF5 321 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 KCNS2Q9ULS6 477 aa8.15□□□□□ -1.11
LIG4-202ENST00000405925 MRPS28Q9Y2Q9 187 aaKnown RBP8.15□□□□□ -1.11
LIG4-202ENST00000405925 SULT1C4O75897 302 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 FAM157BP0CG42 384 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 ARF1P84077 181 aaKnown RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 TPBGQ13641 420 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 DMRTC1Q5HYR2 192 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 FAM27D1Q5T7N8 215 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 OR2A2Q6IF42 318 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms