RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MCUR1Q96AQ8 359 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 NSL1Q96IY1 281 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CLPTM1LQ96KA5 538 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 POM121L2Q96KW2 1035 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 TSSK2Q96PF2 358 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 SOX7Q9BT81 388 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR2H1Q9GZK4 316 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 BPESC1Q9GZL8 116 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 WNT5BQ9H1J7 359 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 SYT4Q9H2B2 425 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 KCNN2Q9H2S1 579 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 C7orf69Q9H7B7 122 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 POLE4Q9NR33 117 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 TAAR3PQ9P1P4 343 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FBXL3Q9UKT7 428 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 COA3Q9Y2R0 106 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 IER3IP1Q9Y5U9 82 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 WNK2Q9Y3S1 2297 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FBN1P35555 2871 aaKnown RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 TCRBV5S2A0A599 114 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 A8MV72 311 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NDUFS8O00217 210 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 DCTN6O00399 190 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC16A7O60669 478 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CDC14BO60729 498 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 KHDRBS3O75525 346 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SNAP29O95721 258 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 FAM107AO95990 144 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NGFP01138 241 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 PTHP01270 115 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 ERCC1P07992 297 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NR2C1P13056 603 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 APEHP13798 732 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 COL8A2P25067 703 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SDHAP31040 664 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 IL2RGP31785 369 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 RBMXP38159 391 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 MPV17P39210 176 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CDKN2AP42771 156 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 GUCA1AP43080 201 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 GSSP48637 474 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CENPAP49450 140 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 EVX1P49640 407 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 GDI2P50395 445 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 KLF3P57682 345 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 MS4A2Q01362 244 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 HNRNPA0Q13151 305 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCNIQ14094 377 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 MEP1BQ16820 701 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 ELFN2Q5R3F8 820 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CYB5R2Q6BCY4 276 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SMARCD3Q6STE5 483 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF786Q8N393 782 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR9Q2Q8NGE9 314 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR1J2Q8NGS2 313 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR4K13Q8NH42 304 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 ABHD4Q8TB40 342 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SYNPRQ8TBG9 265 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC25A40Q8TBP6 338 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 FNDC8Q8TC99 324 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 UBASH3BQ8TF42 649 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NEU4Q8WWR8 484 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 C11orf40Q8WZ69 217 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC7A6Q92536 515 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 YIPF5Q969M3 257 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCDC124Q96CT7 223 aaKnown RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SAMD8Q96LT4 415 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 ERMAPQ96PL5 475 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 GPX7Q96SL4 187 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 IFT27Q9BW83 186 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR2J1Q9GZK6 312 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NDEL1Q9GZM8 345 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NUAK2Q9H093 628 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 LRMDAQ9H2I8 198 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR52D1Q9H346 318 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 MS4A5Q9H3V2 200 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 C1orf198Q9H425 327 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 FN3KQ9H479 309 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 POFUT1Q9H488 388 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NARFLQ9H6Q4 476 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 EGLN3Q9H6Z9 239 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 CHODLQ9H9P2 273 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 IL1RAPQ9NPH3 570 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NRIP3Q9NQ35 241 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 NDE1Q9NXR1 346 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 VNN3Q9NY84 501 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 ACTR3BQ9P1U1 418 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMCC3Q9ULS5 477 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 TIMM10BQ9Y5J6 103 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 LYVE1Q9Y5Y7 322 aa4.93□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGLV3-9A0A075B6K5 115 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 LOC100289279A0A1B0GTE1 492 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 C12orf71A8MTZ7 269 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 TNFRSF11BO00300 401 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 WNT9BO14905 357 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms