RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ZNF416Q9BWM5 594 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 C1QTNF5Q9BXJ0 243 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 WDR76Q9H967 626 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 RPRD1BQ9NQG5 326 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 CYSLTR2Q9NS75 346 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ZNF701Q9NV72 531 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 CNOT2Q9NZN8 540 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 RAB26Q9ULW5 256 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 COA3Q9Y2R0 106 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 NOP16Q9Y3C1 178 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 DHRS7CA6NNS2 312 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 ZNF878C9JN71 531 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 OVOL3O00110 214 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SULT1C4O75897 302 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SOX14O95416 240 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 ATP6V1B1P15313 513 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 ZNF823P16415 610 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 PRKACGP22612 351 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 CAPGP40121 348 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 PSG4Q00888 419 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SNAPC1Q16533 368 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 HIKESHIQ53FT3 197 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 CARD17Q5XLA6 110 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 C11orf71Q6IPW1 123 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 ICA1LQ8NDH6 482 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 TEAD3Q99594 435 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 GSX2Q9BZM3 304 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SEMA6AQ9H2E6 1030 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 FGF20Q9NP95 211 aaPredicted RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 CLN6Q9NWW5 311 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 USP9XQ93008 2570 aaPredicted RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 SGCEO43556 437 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 TFP02787 698 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 OR2T7P0C7T2 308 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SELEP16581 610 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 CFL1P23528 166 aaKnown RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 APOBEC3AP31941 199 aaPredicted RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 APLNRP35414 380 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SLC15A1P46059 708 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 ISL1P61371 349 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 BSPH1Q075Z2 132 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 RAB40BQ12829 278 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 TRIP10Q15642 601 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 FBXW12Q6X9E4 464 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SYT14Q8NB59 555 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SLC30A7Q8NEW0 376 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 PROKR2Q8NFJ6 384 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 OR2AJ1Q8NGZ0 328 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 OR2T27Q8NH04 317 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 OR1F12Q8NHA8 337 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SPSB4Q96A44 273 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 CNN2Q99439 309 aaKnown RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 KCNJ15Q99712 375 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 SH3GL3Q99963 347 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 TRAF4Q9BUZ4 470 aaPredicted RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 IL20RAQ9UHF4 553 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 GPR160Q9UJ42 338 aa6.52□□□□□ -1.37
USP16-204ENST00000399976 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.37
USP16-204ENST00000399976 A0A1W2PPL8 197 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 B9A039 149 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 IFNL4K9M1U5 179 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 DCTN6O00399 190 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 PRKYO43930 277 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 IGHA1P01876 353 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 RAF1P04049 648 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 CD1AP06126 327 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 DANCRP0C864 163 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 ZNF32P17041 273 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 PTNP21246 168 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 KITLGP21583 273 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 STOMP27105 288 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 KCTD18Q6PI47 426 aaPredicted RBP6.51□□□□□ -1.37
USP16-204ENST00000399976 KLBQ86Z14 1044 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 DHRSXQ8N5I4 330 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 OR5L1Q8NGL2 311 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 LILRB1Q8NHL6 650 aaPredicted RBP6.51□□□□□ -1.37
USP16-204ENST00000399976 LINC01560Q8TB33 94 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 TFAP2CQ92754 450 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 FBXW5Q969U6 566 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 LURAP1Q96LR2 239 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 SLC29A1Q99808 456 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 KCNS3Q9BQ31 491 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 YTHDF1Q9BYJ9 559 aaKnown RBP6.51□□□□□ -1.37
USP16-204ENST00000399976 ANKRD60Q9BZ19 345 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 BARX1Q9HBU1 254 aaPredicted RBP6.51□□□□□ -1.37
USP16-204ENST00000399976 HELZ2Q9BYK8 2649 aaKnown RBP6.51□□□□□ -1.37
USP16-204ENST00000399976 LOC390937A0A1W2PQ73 354 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 ZNF503-AS2A6NEH8 195 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 PYCARD-AS1I3L0S3 204 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 ATE1O95260 518 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 CD55P08174 381 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 CSF3P09919 207 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 OPRL1P41146 370 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 GDI2P50395 445 aaKnown RBP6.51□□□□□ -1.37
USP16-204ENST00000399976 SWI5Q1ZZU3 235 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 KLHL22Q53GT1 634 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 PABPC1L2AQ5JQF8 200 aa6.51□□□□□ -1.37
USP16-204ENST00000399976 CLEC12AQ5QGZ9 265 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms