RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 ARMC10Q8N2F6 343 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNF808Q8N4W9 903 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TMEM156Q8N614 296 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TCEANCQ8N8B7 351 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 FAM98AQ8NCA5 519 aaKnown RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 GLYATL2Q8WU03 294 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 RIT1Q92963 219 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 UCN3Q969E3 161 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ANKRD9Q96BM1 317 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SLC35A4Q96G79 324 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SLC41A3Q96GZ6 507 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 LRR1Q96L50 414 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNF582Q96NG8 517 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ERMAPQ96PL5 475 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SDF2Q99470 211 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SDHCQ99643 169 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 MCHR1Q99705 422 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SSX3Q99909 188 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 LMF2Q9BU23 707 aaKnown RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ALOXE3Q9BYJ1 711 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ADAM19Q9H013 955 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CXXC4Q9H2H0 198 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 PPIL3Q9H2H8 161 aaKnown RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 HHATLQ9HCP6 504 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TCF7L1Q9HCS4 588 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 AMBNQ9NP70 447 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 NIT2Q9NQR4 276 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 INPP5EQ9NRR6 644 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 RBFOX1Q9NWB1 397 aaKnown RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TVP23BQ9NYZ1 205 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 MIOXQ9UGB7 285 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SH3BGRL2Q9UJC5 107 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 NPIPA1Q9UND3 350 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SSR3Q9UNL2 185 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 PPIEQ9UNP9 301 aaKnown RBP5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 GAB2Q9UQC2 676 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CLCA3PQ9Y6N3 262 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CACNA1CQ13936 2221 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 C9orf170A2RU37 121 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CDHR4A6H8M9 788 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 C17orf105B2RV13 164 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TEX46H3BTG2 121 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNHIT1O43257 154 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 AKR7A2O43488 359 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TLX2O43763 284 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 PRKYO43930 277 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 NME2P1O60361 137 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 TPST2O60704 377 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ITGA10O75578 1167 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 KRT33AO76009 404 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SOX14O95416 240 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 IGF2P01344 180 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ARSBP15848 533 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CBR1P16152 277 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 PAICSP22234 425 aaKnown RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CRABP1P29762 137 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 HOXC12P31275 282 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 FGF9P31371 208 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 GABRA5P31644 462 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 MTNR1AP48039 350 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 MEOX1P50221 254 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 RORCP51449 518 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 RAG2P55895 527 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CTBP2P56545 445 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 LSM3P62310 102 aaKnown RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 FOXO1Q12778 655 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNF155Q12901 538 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 EXOSC2Q13868 293 aaKnown RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNHIT3Q15649 155 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ELAVL1Q15717 326 aaKnown RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SSX1Q16384 188 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 C3AR1Q16581 482 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 DUSP5Q16690 384 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 HFEQ30201 348 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 PGGHGQ32M88 737 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 KRTCAP3Q53RY4 240 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 RNFT1Q5M7Z0 435 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 HACD4Q5VWC8 232 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CD276Q5ZPR3 534 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CD200R1LQ6Q8B3 271 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNF836Q6ZNA1 936 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 VRK2Q86Y07 508 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SIAH3Q8IW03 269 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR4N5Q8IXE1 308 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 CDK20Q8IZL9 346 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR8H2Q8N162 312 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ZNF321PQ8N8H1 164 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 COX18Q8N8Q8 333 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 ACBD4Q8NC06 268 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 SLC16A11Q8NCK7 471 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 BVESQ8NE79 360 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR2T33Q8NG76 320 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR52L1Q8NGH7 329 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR52I1Q8NGK6 324 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR13C3Q8NGS6 347 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 OR14A16Q8NHC5 309 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 NANPQ8TBE9 248 aa5.79□□□□□ -1.48
SMARCE1P6-201ENST00000398372 PTPMT1Q8WUK0 201 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms