RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 RAB38P57729 211 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 RPS4XP62701 263 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 ERV3-1Q14264 604 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF141Q15928 474 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 HYAL4Q2M3T9 481 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF227Q86WZ6 799 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF676Q8N7Q3 588 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 STEAP2Q8NFT2 490 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 HOXB13Q92826 284 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 TMEM106AQ96A25 262 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 CCDC74AQ96AQ1 378 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 MOGAT1Q96PD6 335 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 TMEM231Q9H6L2 316 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 HRASLS2Q9NWW9 162 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 MTFP1Q9UDX5 166 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 KNL1Q8NG31 2342 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 SERINC4A6NH21 518 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 OR8U8P0C7N1 319 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 RD3LP0DJH9 198 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF14P17017 642 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 NTSR1P30989 418 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 CTXN1P60606 82 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 VWA2Q5GFL6 755 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 TMEM31Q5JXX7 168 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 LPCAT3Q6P1A2 487 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 OR51D1Q8NGF3 324 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 OR8S1Q8NH09 359 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 DVL3Q92997 716 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 DNAJA3Q96EY1 480 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 RBM18Q96H35 190 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 NRIP2Q9BQI9 281 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 S1PR5Q9H228 398 aa14.42□□□□□ -0.1
CHMP1A-201ENST00000397901 A0A1B0GV90 55 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 ELOA3DA6NLF2 546 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF705EA8MWA4 302 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 NPIPB9F8W1W9 429 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 XRCC3O43542 346 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 FARS2O95363 451 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 MT-ND4LP03901 98 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 GTF2F2P13984 249 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 CASRP41180 1078 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 GRK6P43250 576 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 HTR5AP47898 357 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 PRPS1P60891 318 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 PJVKQ0ZLH3 352 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 TAF13Q15543 124 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 GFOD2Q3B7J2 385 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 ELOA3BQ3SY89 546 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 SSX9Q7RTT3 188 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 ELOA3Q8NG57 546 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 OR51S1Q8NGJ8 323 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 OR5M8Q8NGP6 311 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 OR6N2Q8NGY6 317 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 RNF141Q8WVD5 230 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 SPSB2Q99619 263 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 GGACTQ9BVM4 153 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 CHST6Q9GZX3 395 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 Q9N2J8 555 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 CLEC1BQ9P126 229 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 LAMP5Q9UJQ1 280 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 TRBV5-5A0A0J9YX44 114 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 A0A1W2PQF6 199 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 FOXS1O43638 330 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 ABHD16AO95870 558 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 CD63P08962 238 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 HOXC4P09017 264 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 COL9A1P20849 921 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 PMELP40967 661 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 RIDAP52758 137 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 INPP5JQ15735 1006 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 ALG10Q5BKT4 473 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 RSC1A1Q92681 617 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 LMF1Q96S06 567 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 FANCMQ8IYD8 2048 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 CEP290O15078 2479 aa14.41□□□□□ -0.1
CHMP1A-201ENST00000397901 TRAV18A0A075B6X5 111 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 A0A1B0GTI1 187 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 SULT2B1O00204 365 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 AKAIN1P0CW23 69 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 RBM39Q14498 530 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 LRRC69Q6ZNQ3 347 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 DPY19L4Q7Z388 723 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 BCORP1Q8N888 145 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 OR2G2Q8NGZ5 317 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 BMFQ96LC9 184 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 POFUT1Q9H488 388 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 WDR76Q9H967 626 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 SEC61A2Q9H9S3 476 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 FAM60AQ9NP50 221 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 UPB1Q9UBR1 384 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 STEAP1Q9UHE8 339 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 CACNA1IQ9P0X4 2223 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 A0A0A6YYC8 382 aaPredicted RBP14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 OR4C45A6NMZ5 311 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 I3L1I5 382 aaPredicted RBP14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 CTAG2O75638 210 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 CD14P08571 375 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 OR4E1P0C645 316 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 NQO2P16083 231 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 LAP3P28838 519 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms