RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CNTNAP3Q9BZ76 1288 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ST6GALNAC2Q9UJ37 374 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ENPP5Q9UJA9 477 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 LRRTM2O43300 516 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ARF1P84077 181 aaKnown RBP24.15■■□□□ 1.46
CPNE1-203ENST00000397442 NRN1LQ496H8 165 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 P2RY8Q86VZ1 359 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 SLC22A24Q8N4F4 322 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 OR2AJ1Q8NGZ0 328 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 UFD1Q92890 307 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 FBXO17Q96EF6 278 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 WBP1Q96G27 269 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 SH3GL3Q99963 347 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 C1orf198Q9H425 327 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ELOVL3Q9HB03 270 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 TINAGQ9UJW2 476 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 SHANK1Q9Y566 2161 aa24.14■■□□□ 1.46
CPNE1-203ENST00000397442 INTS1Q8N201 2190 aaKnown RBP24.14■■□□□ 1.46
CPNE1-203ENST00000397442 CCDC160A6NGH7 325 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 RER1O15258 196 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 CELP19835 753 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 PSMB10P40306 273 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 TMBIM6P55061 237 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 PER3P56645 1201 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 HIST1H3AP68431 136 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 HIST2H3PS2Q5TEC6 136 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 C9orf135Q5VTT2 229 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 HIST2H3AQ71DI3 136 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 YIPF7Q8N8F6 280 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 ZNF420Q8TAQ5 688 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-203ENST00000397442 SLAMF6Q96DU3 332 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 DOK1Q99704 481 aa24.14■■□□□ 1.45
CPNE1-203ENST00000397442 PNRC2Q9NPJ4 139 aaKnown RBP24.14■■□□□ 1.45
CPNE1-203ENST00000397442 SF3B6Q9Y3B4 125 aaKnown RBP24.14■■□□□ 1.45
CPNE1-203ENST00000397442 CRHP06850 196 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 TACSTD2P09758 323 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 GLI4P10075 376 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 GADD45AP24522 165 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 CEACAM8P31997 349 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-203ENST00000397442 OPRL1P41146 370 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 GBX2P52951 348 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-203ENST00000397442 TAS2R43P59537 309 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 AQP6Q13520 282 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 FAM220AQ7Z4H9 259 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 BTLAQ7Z6A9 289 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 STARD4Q96DR4 205 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 MROQ9BYG7 248 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 PLSCR4Q9NRQ2 329 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 RSL24D1Q9UHA3 163 aaKnown RBP24.13■■□□□ 1.45
CPNE1-203ENST00000397442 LRP12Q9Y561 859 aa24.13■■□□□ 1.45
CPNE1-203ENST00000397442 OGG1O15527 345 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 GABARAPO95166 117 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 CGAP01215 116 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 ITGA5P08648 1049 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 CST2P09228 141 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 TMIGD3P0DMS9 266 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-203ENST00000397442 NR4A1P22736 598 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 CTF1Q16619 201 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 DMKNQ6E0U4 476 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-203ENST00000397442 KLHL24Q6TFL4 600 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 ZNF813Q6ZN06 617 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 ABHD12BQ7Z5M8 362 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-203ENST00000397442 KRT77Q7Z794 578 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 HSD17B8Q92506 261 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 RPL3LQ92901 407 aaKnown RBP24.12■■□□□ 1.45
CPNE1-203ENST00000397442 ZFP3Q96NJ6 502 aa24.12■■□□□ 1.45
CPNE1-203ENST00000397442 RP1L1Q8IWN7 2480 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-203ENST00000397442 ZNF701M0R085 212 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-203ENST00000397442 PLPP2O43688 288 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 RPP14O95059 124 aaKnown RBP24.11■■□□□ 1.45
CPNE1-203ENST00000397442 IL18BPO95998 194 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 IL2RAP01589 272 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 MPGP29372 298 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 NANOS3P60323 173 aaKnown RBP24.11■■□□□ 1.45
CPNE1-203ENST00000397442 RBPJQ06330 500 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 GPR50Q13585 617 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 CCDC58Q4VC31 144 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 OR7E24Q6IFN5 339 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 DEGS2Q6QHC5 323 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 SKA3Q8IX90 412 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 RPS4Y2Q8TD47 263 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 OR51E2Q9H255 320 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 HSPB2A8KAH6 182 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 TGM4P49221 684 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 CDK5R1Q15078 307 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 HSPB2Q16082 182 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 EIF2S3LQ2VIR3 472 aaKnown RBP24.11■■□□□ 1.45
CPNE1-203ENST00000397442 RHOUQ7L0Q8 258 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 RAB2BQ8WUD1 216 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 C12orf43Q96C57 262 aaKnown RBP24.11■■□□□ 1.45
CPNE1-203ENST00000397442 CENPMQ9NSP4 180 aa24.11■■□□□ 1.45
CPNE1-203ENST00000397442 H3BMQ9 156 aa24.1■■□□□ 1.45
CPNE1-203ENST00000397442 ZNF254O75437 659 aa24.1■■□□□ 1.45
CPNE1-203ENST00000397442 CNOT4O95628 575 aaKnown RBP24.1■■□□□ 1.45
CPNE1-203ENST00000397442 RPS25P62851 125 aaKnown RBP24.1■■□□□ 1.45
CPNE1-203ENST00000397442 RPL22L1Q6P5R6 122 aaKnown RBP24.1■■□□□ 1.45
CPNE1-203ENST00000397442 GJC3Q8NFK1 279 aa24.1■■□□□ 1.45
CPNE1-203ENST00000397442 FGFBP3Q8TAT2 258 aa24.1■■□□□ 1.45
CPNE1-203ENST00000397442 PGLYRP3Q96LB9 341 aa24.1■■□□□ 1.45
CPNE1-203ENST00000397442 ZNF224Q9NZL3 707 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms