RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TIMM10BQ9Y5J6 103 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 INTS1Q8N201 2190 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF254O75437 659 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 MT-ND5P03915 603 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 PSMB1P20618 241 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 RPS27P42677 84 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 NR1H2P55055 460 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 UBE2NP61088 152 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 ROM1Q03395 351 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 SFRP5Q5T4F7 317 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 TMEM53Q6P2H8 277 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 TMEM154Q6P9G4 183 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 LUZP2Q86TE4 346 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 ST7LQ8TDW4 575 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 RNF133Q8WVZ7 376 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 RORBQ92753 470 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 BCL2L2Q92843 193 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 SH3GL3Q99963 347 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF649Q9BS31 505 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 HDHD2Q9H0R4 259 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 IKZF2Q9UKS7 526 aa20.65■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF878C9JN71 531 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 LRRTM2O43300 516 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 RAD51DO75771 328 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 LYZL6O75951 148 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 PRB1P04280 392 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 ADRA2AP08913 450 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 PCMT1P22061 227 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 IL32P24001 234 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 ARR3P36575 388 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 HCCSP53701 268 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 FOXG1P55316 489 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 TAS2R43P59537 309 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 HIST1H3AP68431 136 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 SPHARQ15513 63 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 GABRA6Q16445 453 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 TBRG1Q3YBR2 411 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 SOWAHCQ53LP3 525 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 HIST2H3PS2Q5TEC6 136 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 UBE2UQ5VVX9 321 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 ZNF474Q6S9Z5 364 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 NCCRP1Q6ZVX7 275 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 HIST2H3AQ71DI3 136 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 BHLHA15Q7RTS1 189 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 SSX8Q7RTT4 187 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 KRT77Q7Z794 578 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 CXorf67Q86X51 503 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 SKA3Q8IX90 412 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 ZNF679Q8IYX0 411 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 RELL2Q8NC24 303 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 SMAP2Q8WU79 429 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 SLAMF6Q96DU3 332 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 OR8B4Q96RC9 309 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 NIPAL2Q9H841 368 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 CLEC2DQ9UHP7 191 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 ATPIF1Q9UII2 106 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 FBXL3Q9UKT7 428 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 FREM1Q5H8C1 2179 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 IGSF10Q6WRI0 2623 aa20.64■□□□□ 0.89
TSPAN4-202ENST00000397396 A0A096LPE4 126 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 ARPC4-TTLL3A0A0A6YYG9 625 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 A0A1W2PPZ6 126 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 METTL15A6NJ78 407 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 PTHP01270 115 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 MAP2K4P45985 399 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 ASCL1P50553 236 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 ECH1Q13011 328 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 RAB35Q15286 201 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 IGFBP7Q16270 282 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 CORO6Q6QEF8 472 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 ALDH16A1Q8IZ83 802 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 STEAP2Q8NFT2 490 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 HTRA1Q92743 480 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 FBXO17Q96EF6 278 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 CCDC120Q96HB5 630 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 OR10A4Q9H209 315 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 RNF121Q9H920 327 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 ISYNA1Q9NPH2 558 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 TRIM36Q9NQ86 728 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 ERRFI1Q9UJM3 462 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 KLHDC2Q9Y2U9 406 aa20.63■□□□□ 0.89
TSPAN4-202ENST00000397396 SGCEO43556 437 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 H2BFMP0C1H6 154 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 PSKH1P11801 424 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 JUNBP17275 347 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 CD79BP40259 229 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 RIDAP52758 137 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 GRB2P62993 217 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 BDH1Q02338 343 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 MED22Q15528 200 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 ZNF684Q5T5D7 378 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 OTPQ5XKR4 325 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 SSX6Q7RTT6 188 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 P2RY8Q86VZ1 359 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 RFLNBQ8N5W9 214 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 C4orf36Q96KX1 117 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 DDX28Q9NUL7 540 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 PLEK2Q9NYT0 353 aa20.62■□□□□ 0.89
TSPAN4-202ENST00000397396 GNG8Q9UK08 70 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms