RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 RIPPLY2Q5TAB7 128 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 UBE2UQ5VVX9 321 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ZNF367Q7RTV3 350 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 GPR141Q7Z602 305 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 NANOGP1Q8N7R0 232 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 MUL1Q969V5 352 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ALG8Q9BVK2 526 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 CDADC1Q9BWV3 514 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 MARCH7Q9H992 704 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 CRLF2Q9HC73 371 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 MRPL22Q9NWU5 206 aaKnown RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 EMC9Q9Y3B6 208 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 DHHO43323 396 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 TMCC2O75069 709 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 INMTO95050 263 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 LCKP06239 509 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 SPARCP09486 303 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 GAAP10253 952 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 DNASE1P24855 282 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ZNF133P52736 654 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 WNT4P56705 351 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 GALEQ14376 348 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 MEP1BQ16820 701 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 DPY19L4Q7Z388 723 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 CDC20BQ86Y33 519 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 UBE2J2Q8N2K1 259 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 SNX33Q8WV41 574 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 TMIGD2Q96BF3 282 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ALKBH3Q96Q83 286 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 CLEC4MQ9H2X3 399 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 UPB1Q9UBR1 384 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 PLEKHA6Q9Y2H5 1048 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 CAB39Q9Y376 341 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 DNHD1Q96M86 4753 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 PHYHO14832 338 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 MPZL1O95297 269 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 IGHV3-9P01782 118 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 CDAP32320 146 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 KIR2DL3P43628 341 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 ACTA2P62736 377 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 ACTG2P63267 376 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 SNTB1Q13884 538 aaKnown RBP11.63□□□□□ -0.55
SEC13-209ENST00000397117 RAB39AQ14964 217 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 SPHARQ15513 63 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 SGCAQ16586 387 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 TIGD6Q17RP2 521 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 TSPO2Q5TGU0 170 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 SLC18B1Q6NT16 456 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 FAM214BQ7L5A3 538 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 NUFIP2Q7Z417 695 aaKnown RBP11.63□□□□□ -0.55
SEC13-209ENST00000397117 GCNT2Q8N0V5 402 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 CNEP1R1Q8N9A8 125 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 C9orf106Q8NAJ2 232 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 OR52N1Q8NH53 320 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 THEM6Q8WUY1 208 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 GATAD2BQ8WXI9 593 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 C11orf40Q8WZ69 217 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 OR5M11Q96RB7 305 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 LINC00470Q9BZP3 86 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 C12orf49Q9H741 205 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 GPR35Q9HC97 309 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 CRIM1Q9NZV1 1036 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 POLR1DQ9Y2S0 133 aa11.63□□□□□ -0.55
SEC13-209ENST00000397117 MSR1P21757 451 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 TTKP33981 857 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 SIRPAP78324 504 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
SEC13-209ENST00000397117 ZNF85Q03923 595 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 SYT6Q5T7P8 510 aaPredicted RBP11.62□□□□□ -0.55
SEC13-209ENST00000397117 OR2G6Q5TZ20 316 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 OTPQ5XKR4 325 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 ZNF322Q6U7Q0 402 aaPredicted RBP11.62□□□□□ -0.55
SEC13-209ENST00000397117 ABHD12BQ7Z5M8 362 aaPredicted RBP11.62□□□□□ -0.55
SEC13-209ENST00000397117 OTOSQ8NHW6 89 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 ASB17Q8WXJ9 295 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 COG8Q96MW5 612 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 TTTY10Q9BZA0 68 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 NELFAQ9H3P2 528 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 POLE4Q9NR33 117 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 KCNG2Q9UJ96 466 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 EDARQ9UNE0 448 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 COPS3Q9UNS2 423 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 LSM2Q9Y333 95 aaKnown RBP11.62□□□□□ -0.55
SEC13-209ENST00000397117 UGT2A1Q9Y4X1 527 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 CEPT1Q9Y6K0 416 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 VPS13CQ709C8 3753 aa11.62□□□□□ -0.55
SEC13-209ENST00000397117 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 J3QLW9 94 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 SEC14L2O76054 403 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 MT-ND5P03915 603 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 ZNF19P17023 458 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms