RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 EMC4Q5J8M3 183 aa13.61□□□□□ -0.23
MCF2L-205ENST00000397017 ATAD3CQ5T2N8 411 aa13.61□□□□□ -0.23
MCF2L-205ENST00000397017 NCCRP1Q6ZVX7 275 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-205ENST00000397017 SPTSSAQ969W0 71 aa13.61□□□□□ -0.23
MCF2L-205ENST00000397017 OXGR1Q96P68 337 aa13.61□□□□□ -0.23
MCF2L-205ENST00000397017 GDF2Q9UK05 429 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-205ENST00000397017 LAMA1P25391 3075 aa13.61□□□□□ -0.23
MCF2L-205ENST00000397017 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 KLRC4-KLRK1H3BQV0 150 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 GATBO75879 557 aaKnown RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 WISP1O95388 367 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 EFNA3P52797 238 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 INSM1Q01101 510 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 PCOLCEQ15113 449 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 FOXRED2Q8IWF2 684 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 RABL2BQ9UNT1 228 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 ZNF432O94892 652 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 RAB3AP20336 220 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 SNRPD2P62316 118 aaKnown RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 IFITM3Q01628 133 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 ATXN7L3Q14CW9 347 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 SLC36A2Q495M3 483 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 FAM198BQ6UWH4 519 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 TMEM91Q6ZNR0 172 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 SLC7A5P1Q8MH63 180 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 SYS1Q8N2H4 156 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 OR5D14Q8NGL3 314 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 HOXB13Q92826 284 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 RADILQ96JH8 1075 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 ZNF385AQ96PM9 386 aaKnown RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 GGT3PA6NGU5 568 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 LIPT2A6NK58 231 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 PTTG1O95997 202 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 ANKRD34CP0C6C1 535 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 EDN3P14138 238 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 NAGAP17050 411 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 KLK2P20151 261 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 GABRR1P24046 479 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 MAGEA5P43359 124 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 SELENOPP49908 381 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 NANOS3P60323 173 aaKnown RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 MFAP5Q13361 173 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 TMEM81Q6P7N7 255 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 TPRA1Q86W33 373 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 MFSD4AQ8N468 514 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 ZBTB8BQ8NAP8 495 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-205ENST00000397017 GPR84Q9NQS5 396 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 ABCA4P78363 2273 aa13.6□□□□□ -0.23
MCF2L-205ENST00000397017 A0A087WV48 116 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 TRIM64A6NGJ6 449 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ASAH2BP0C7U1 165 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 GSTT2BP0CG30 244 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ALOX5APP20292 161 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 MST1P26927 711 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 PRSS3P35030 304 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 CX3CR1P49238 355 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 VEGFCP49767 419 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 SLC10A1Q14973 349 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 CEACAM16Q2WEN9 425 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 CADM3Q8N126 398 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 OR10D3Q8NH80 312 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 FNDC9Q8TBE3 224 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ABHD3Q8WU67 409 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 A0A1W2PQD3 144 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 MEIOCA2RUB1 952 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 TPOP07202 933 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 CCL2P13500 99 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 DCAF10Q5QP82 559 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ZNF585AQ6P3V2 769 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 STAC2Q6ZMT1 411 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 Q6ZNX1 250 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 PXKQ7Z7A4 578 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 SNIP1Q8TAD8 396 aaKnown RBP13.59□□□□□ -0.23
MCF2L-205ENST00000397017 PRO3102Q9H379 93 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 AUNIPQ9H7T9 357 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 RHBDD3Q9Y3P4 386 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 IGF2RP11717 2491 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 FTH1P19P0C7X4 201 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 COX6A1P12074 109 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 NAT1P18440 290 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 UBE2NP61088 152 aaKnown RBP13.59□□□□□ -0.23
MCF2L-205ENST00000397017 PMP22Q01453 160 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 PLPPR5Q32ZL2 321 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 CDCP2Q5VXM1 449 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 MCHR2Q969V1 340 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ATF6BQ99941 703 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 SELENOIQ9C0D9 397 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 ZFP64Q9NPA5 681 aa13.59□□□□□ -0.23
MCF2L-205ENST00000397017 LSM2Q9Y333 95 aaKnown RBP13.59□□□□□ -0.23
MCF2L-205ENST00000397017 HSPB6O14558 160 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 AMY2AP04746 511 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 UMODP07911 640 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 CD96P40200 585 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 CACNA1BQ00975 2339 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 TATDN3Q17R31 274 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms