RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 GRIP2Q9C0E4 1043 aa25.43■■□□□ 1.66
CHCHD4-202ENST00000396914 USE1Q9NZ43 259 aa25.43■■□□□ 1.66
CHCHD4-202ENST00000396914 ROS1P08922 2347 aa25.43■■□□□ 1.66
CHCHD4-202ENST00000396914 AKAP6Q13023 2319 aa25.43■■□□□ 1.66
CHCHD4-202ENST00000396914 ZAR1LA6NP61 321 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 CD53P19397 219 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 HTR5AP47898 357 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 RPS7P62081 194 aaKnown RBP25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 ZIK1Q3SY52 487 aaPredicted RBP25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 AGAP6Q5VW22 663 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 SLX4IPQ5VYV7 408 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 CXXC5Q7LFL8 322 aaKnown RBP25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 ZNF511Q8NB15 262 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 GJC3Q8NFK1 279 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 PTP4A1Q93096 173 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 PIGTQ969N2 578 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 GABARAPL3Q9BY60 117 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 HINT3Q9NQE9 182 aaKnown RBP25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 MRPL22Q9NWU5 206 aaKnown RBP25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 LHFPL6Q9Y693 200 aa25.42■■□□□ 1.66
CHCHD4-202ENST00000396914 RAI1Q7Z5J4 1906 aaPredicted RBP25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 VSTM5A8MXK1 200 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 RER1O15258 196 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 SOD3P08294 240 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 FAM157BP0CG42 384 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 NR4A1P22736 598 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 APOBEC3AP31941 199 aaPredicted RBP25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 TTKP33981 857 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 BLVRAP53004 296 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 ZNF544Q6NX49 715 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 TMEM154Q6P9G4 183 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 MUC15Q8N387 334 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 PAQR4Q8N4S7 273 aaPredicted RBP25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 NUP37Q8NFH4 326 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 SPG11Q96JI7 2443 aa25.41■■□□□ 1.66
CHCHD4-202ENST00000396914 M0R129 80 aa25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 SPARCP09486 303 aa25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 THBS4P35443 961 aa25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 ELF3P78545 371 aaPredicted RBP25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 TRIP10Q15642 601 aa25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 WDR76Q9H967 626 aa25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 EIF3KQ9UBQ5 218 aaKnown RBP25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 NDRG4Q9ULP0 352 aaKnown RBP25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 PDZD2O15018 2839 aa25.4■■□□□ 1.66
CHCHD4-202ENST00000396914 TLX2O43763 284 aaPredicted RBP25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 PRKYO43930 277 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 TMCC2O75069 709 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 GLCEO94923 617 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 DANCRP0C864 163 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 RPS27P42677 84 aaKnown RBP25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 LRRC36Q1X8D7 754 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 C12orf73Q69YU5 71 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 VASH1Q7L8A9 365 aaPredicted RBP25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 TCEANCQ8N8B7 351 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 BBS1Q8NFJ9 593 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 POM121L2Q96KW2 1035 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 PITX2Q99697 317 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 SLC29A1Q99808 456 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 KCNG2Q9UJ96 466 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 COMMD3-BMI1R4GMX3 469 aa25.39■■□□□ 1.66
CHCHD4-202ENST00000396914 CSMD2Q7Z408 3487 aa25.39■■□□□ 1.65
CHCHD4-202ENST00000396914 DSCAMO60469 2012 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 LOC100509620A0A075B734 347 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 GSTT1P30711 240 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 RAB35Q15286 201 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 CCDC92Q53HC0 331 aaPredicted RBP25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 SLC18B1Q6NT16 456 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 ZNF771Q7L3S4 317 aaPredicted RBP25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 ERI1Q8IV48 349 aaKnown RBP25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 ZMYND19Q96E35 227 aaPredicted RBP25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 IL4I1Q96RQ9 567 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 CXorf56Q9H5V9 222 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 CYB5R1Q9UHQ9 305 aa25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 GDF2Q9UK05 429 aaPredicted RBP25.38■■□□□ 1.65
CHCHD4-202ENST00000396914 ZNF593O00488 134 aaPredicted RBP25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 SMPD2O60906 423 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 SNAP29O95721 258 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 LCKP06239 509 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 OR4A8P0C604 315 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 GGT2P36268 569 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 SERPINF1P36955 418 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 ENTPD1P49961 510 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 RPS23P62266 143 aaKnown RBP25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 DEFB113Q30KQ7 82 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 OR1F12Q8NHA8 337 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 H2AFY2Q9P0M6 372 aaPredicted RBP25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 H0YHG0 523 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 PRODHO43272 600 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 GPRIN2O60269 458 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 COX5BP10606 129 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 RAD52P43351 418 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 APOFQ13790 326 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 ELFN2Q5R3F8 820 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 CFAP77Q6ZQR2 320 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 OR6N2Q8NGY6 317 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 INTS14Q96SY0 518 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 TOR3AQ9H497 397 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 CBLN4Q9NTU7 201 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 CMAHPQ9Y471 501 aa25.37■■□□□ 1.65
CHCHD4-202ENST00000396914 SYNGR3O43761 229 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms