RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 P4HTMQ9NXG6 502 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 NUFIP1Q9UHK0 495 aaKnown RBP14.39□□□□□ -0.11
SNX6-202ENST00000396526 G3V3Y1 287 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 ISG15P05161 165 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 PGA4P0DJD7 388 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 PGA3P0DJD8 388 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 GDNFP39905 211 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 CSNK1A1P48729 337 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 RPS18P62269 152 aaKnown RBP14.39□□□□□ -0.11
SNX6-202ENST00000396526 SIAH3Q8IW03 269 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 SERPINA12Q8IW75 414 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 IZUMO1Q8IYV9 350 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 ASB5Q8WWX0 329 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 GPR87Q9BY21 358 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 QDPRP09417 244 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 LAMA1P25391 3075 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 SRD5A2P31213 254 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 CASRP41180 1078 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 CYB561P49447 251 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 ACER2Q5QJU3 275 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 CORO6Q6QEF8 472 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 RHOUQ7L0Q8 258 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 MDGA2Q7Z553 956 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 FOXRED1Q96CU9 486 aaPredicted RBP14.39□□□□□ -0.11
SNX6-202ENST00000396526 MOB1AQ9H8S9 216 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 CYB5R1Q9UHQ9 305 aa14.39□□□□□ -0.11
SNX6-202ENST00000396526 ZNF878C9JN71 531 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 SLC17A2O00624 439 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 GABREP78334 506 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 FOXK1P85037 733 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 MFGE8Q08431 387 aaPredicted RBP14.38□□□□□ -0.11
SNX6-202ENST00000396526 ATAD3CQ5T2N8 411 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 PRSS45Q7RTY3 260 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 OR14L1PQ8NHC6 308 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 KCNE4Q8WWG9 221 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 ALG5Q9Y673 324 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 LOC107986453A0A1B0GWG9 222 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 DNPH1O43598 174 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 FAUP35544 74 aaKnown RBP14.38□□□□□ -0.11
SNX6-202ENST00000396526 KCNJ8Q15842 424 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 PLA2G2CQ5R387 149 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 DACT3Q96B18 629 aaPredicted RBP14.38□□□□□ -0.11
SNX6-202ENST00000396526 STMN3Q9NZ72 180 aa14.38□□□□□ -0.11
SNX6-202ENST00000396526 A0A087WV48 116 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 IGKV1D-43A0A0B4J1Z2 117 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 A0A1B0GVI7 797 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 MT-CO3P00414 261 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 ARSBP15848 533 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 SRP9P49458 86 aaKnown RBP14.37□□□□□ -0.11
SNX6-202ENST00000396526 SLC25A47Q6Q0C1 308 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 CDH24Q86UP0 819 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 NKAIN3Q8N8D7 197 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 INTS12Q96CB8 462 aaKnown RBP14.37□□□□□ -0.11
SNX6-202ENST00000396526 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 SH2D2AQ9NP31 389 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 GDF2Q9UK05 429 aaPredicted RBP14.37□□□□□ -0.11
SNX6-202ENST00000396526 LOC100289279A0A1B0GTE1 492 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 C21orf140B9A014 251 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 FAM157BP0CG42 384 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 CD59P13987 128 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 FSTP19883 344 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 P2RY4P51582 365 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 TIPARPQ7Z3E1 657 aaKnown RBP14.37□□□□□ -0.11
SNX6-202ENST00000396526 OR51D1Q8NGF3 324 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 AKAP1Q92667 903 aaKnown RBP eCLIP14.37□□□□□ -0.11
SNX6-202ENST00000396526 FAM3DQ96BQ1 224 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 UPRTQ96BW1 309 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 FAM117AQ9C073 453 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 TMEM9BQ9NQ34 198 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 SLC17A5Q9NRA2 495 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 ITGB1BP2Q9UKP3 347 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 FBXL3Q9UKT7 428 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 SYT7O43581 403 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 TCRBP04435 133 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 CDK2P24941 298 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 MNDAP41218 407 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 C19orf57Q0VDD7 668 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 SLC36A2Q495M3 483 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 PLA1AQ53H76 456 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 JMJD6Q6NYC1 403 aaPredicted RBP14.37□□□□□ -0.11
SNX6-202ENST00000396526 OR6M1Q8NGM8 313 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 OR2B2Q9GZK3 357 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 NUDT15Q9NV35 164 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 TAS2R8Q9NYW2 309 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 GLTPQ9NZD2 209 aa14.37□□□□□ -0.11
SNX6-202ENST00000396526 KIF26BQ2KJY2 2108 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 ZIC3O60481 467 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 GNALP38405 381 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 PPP1R14AQ96A00 147 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 PLEKHA1Q9HB21 404 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 XRCC3O43542 346 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 RBBP9O75884 186 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 GIFP27352 417 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 HTR2CP28335 458 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 POU3F4P49335 361 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 ZNF84P51523 738 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 SGCAQ16586 387 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 ABHD17BQ5VST6 288 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 NHLRC1Q6VVB1 395 aa14.36□□□□□ -0.11
SNX6-202ENST00000396526 JAGN1Q8N5M9 183 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms