RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 AIREO43918 545 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 EDN3P14138 238 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 KIR2DL2P43627 348 aaPredicted RBP17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 RIDAP52758 137 aaKnown RBP17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 AQP6Q13520 282 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 TIMM50Q3ZCQ8 353 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 CCDC58Q4VC31 144 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 C9orf135Q5VTT2 229 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 RPL22L1Q6P5R6 122 aaKnown RBP17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 SLC22A24Q8N4F4 322 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 OR6K3Q8NGY3 331 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 RNF133Q8WVZ7 376 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 DOK1Q99704 481 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 OR51E2Q9H255 320 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 MALT1Q9UDY8 824 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 LRP12Q9Y561 859 aa17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 PRRC2CQ9Y520 2896 aaKnown RBP17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 NCOA6Q14686 2063 aaPredicted RBP17.95■□□□□ 0.46
VCPKMT-202ENST00000395860 H3BMQ9 156 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 SLC19A2O60779 497 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 IL2RAP01589 272 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 H2BFMP0C1H6 154 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 LSM3P62310 102 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 ARF1P84077 181 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 FOXF2Q12947 444 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 OR7E24Q6IFN5 339 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 ARL9Q6T311 187 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 TFAP2EQ6VUC0 442 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 C3P1Q6ZMU1 363 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 TMEM203Q969S6 136 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 SH3GL3Q99963 347 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 ST6GALNAC2Q9UJ37 374 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 ZNF835Q9Y2P0 537 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 CACNA1CQ13936 2221 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 ZGRF1Q86YA3 2104 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 RER1O15258 196 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 OGG1O15527 345 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 LRRTM2O43300 516 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 PLPP2O43688 288 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 ZNF254O75437 659 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 FARS2O95363 451 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 CST2P09228 141 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 TMIGD3P0DMS9 266 aaPredicted RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 TIMP3P35625 211 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 TGM4P49221 684 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 RPS25P62851 125 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 SLC3A1Q07837 685 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 CDK5R1Q15078 307 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 CTF1Q16619 201 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 EIF2S3LQ2VIR3 472 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 NRN1LQ496H8 165 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 DMKNQ6E0U4 476 aaPredicted RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 VWA1Q6PCB0 445 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 DEGS2Q6QHC5 323 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 KLHL24Q6TFL4 600 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 DOLPP1Q86YN1 238 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 RPRMLQ8N4K4 120 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 GJC3Q8NFK1 279 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 RPL3LQ92901 407 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 BCL7BQ9BQE9 202 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 CHCHD6Q9BRQ6 235 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 STUB1Q9UNE7 303 aa17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 SF3B6Q9Y3B4 125 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-202ENST00000395860 TRBV2A0A0J9YWF9 115 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 LOC100506127A0A0U1RQW1 187 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 ZNF878C9JN71 531 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 TOXO94900 526 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 GABRA5P31644 462 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 FOXG1P55316 489 aaPredicted RBP17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 CNPY1Q3B7I2 92 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 OR10S1Q8NGN2 331 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 FBXO17Q96EF6 278 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 ZFP3Q96NJ6 502 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 TMED9Q9BVK6 235 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 KCNN2Q9H2S1 579 aa17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 EXOSC4Q9NPD3 245 aaKnown RBP17.93■□□□□ 0.46
VCPKMT-202ENST00000395860 ZZEF1O43149 2961 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 CRHP06850 196 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 MPGP29372 298 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 OPRL1P41146 370 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 TAF13Q15543 124 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 SLC16A14Q7RTX9 510 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 SMIM19Q96E16 107 aa17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 DSPP15924 2871 aaKnown RBP17.92■□□□□ 0.46
VCPKMT-202ENST00000395860 GPX5O75715 221 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 TNFSF13O75888 250 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 GDI2P50395 445 aaKnown RBP17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 ALKBH1Q13686 389 aaKnown RBP17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 PCSK4Q6UW60 755 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 RHOUQ7L0Q8 258 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 ZNF627Q7L945 461 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 SKA3Q8IX90 412 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 HSD17B8Q92506 261 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 RNF166Q96A37 237 aaPredicted RBP17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 PNRC2Q9NPJ4 139 aaKnown RBP17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 TINAGQ9UJW2 476 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 SSR3Q9UNL2 185 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 PROCRQ9UNN8 238 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 CD53P19397 219 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms