RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 LRRC8AQ8IWT6 810 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 PDIK1LQ8N165 341 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 ING5Q8WYH8 240 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 DCUN1D4Q92564 292 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 FRAT1Q92837 279 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 TOP1MTQ969P6 601 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MARC2Q969Z3 335 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 C8orf44Q96CB5 159 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MED8Q96G25 268 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 KCTD14Q9BQ13 255 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MED10Q9BTT4 135 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 DERL2Q9GZP9 239 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 SIAEQ9HAT2 523 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 NTN4Q9HB63 628 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 LYRM4Q9HD34 91 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 C8orf4Q9NR00 106 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF302Q9NR11 478 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 DYRK4Q9NR20 520 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 EURLQ9NYK6 297 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 SAMHD1Q9Y3Z3 626 aaKnown RBP3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 CDH10Q9Y6N8 788 aa3.54□□□□□ -1.84
HMGB1P10-201ENST00000395823 MSH6P52701 1360 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 CHD4Q14839 1912 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 IGKV3D-20A0A0C4DH25 116 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 FAM231BA6NCW3 169 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 SIRPB1O00241 398 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 DENRO43583 198 aaKnown RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 EEDO75530 441 aaKnown RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 EIF3GO75821 320 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 KLK2P20151 261 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 BCKDHBP21953 392 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZBTB25P24278 435 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 IL12BP29460 328 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 UQCRFS1P47985 274 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 RORCP51449 518 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 SSR4P51571 173 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 MAGOHP61326 146 aaKnown RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 S100A12P80511 92 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 CDH17Q12864 832 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 FZD2Q14332 565 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 HERPUD1Q15011 391 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 NSDHLQ15738 373 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 PSG3Q16557 428 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 NRF1Q16656 503 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF630Q2M218 657 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 ANKRD26P1Q6NSI1 321 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 H3F3CQ6NXT2 135 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 MMAAQ8IVH4 418 aaKnown RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 CMTM1Q8IZ96 169 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 LIX1Q8N485 282 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 SNX31Q8N9S9 440 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR5B3Q8NH48 314 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR52E5Q8NH55 327 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 SLC7A13Q8TCU3 470 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 FAM151AQ8WW52 585 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 CEP19Q96LK0 163 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 NAPGQ99747 312 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 SLC25A22Q9H936 323 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 CCNB1IP1Q9NPC3 277 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 PXMP2Q9NR77 195 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 PAQR5Q9NXK6 330 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 ING4Q9UNL4 249 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 THOC2Q8NI27 1593 aaKnown RBP3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 BICRAQ9NZM4 1560 aa3.53□□□□□ -1.84
HMGB1P10-201ENST00000395823 TNRQ92752 1358 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 E7EWF7 191 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 HAT1O14929 419 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 COCHO43405 550 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 FAM189A1O60320 539 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SCN2BO60939 215 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 NPIPB7O75200 414 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 TNFSF13O75888 250 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ASS1P00966 412 aaKnown RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SERPINA5P05154 406 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 PNMA6AP0CW24 399 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 MLNP12872 115 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ICAM2P13598 275 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 PSMB6P28072 239 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC1A1P43005 524 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 RFX3P48380 749 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 CDC34P49427 236 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 CAV2P51636 162 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 EMP2P54851 167 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 FGF8P55075 233 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACTA2P62736 377 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACTG2P63267 376 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACTC1P68032 377 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACTA1P68133 377 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ARFRP1Q13795 201 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC1A5Q15758 541 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 MOGQ16653 247 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 RNF212Q495C1 297 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZNF470Q6ECI4 717 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 TTC33Q6PID6 262 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 FAM151BQ6UXP7 276 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC35D2Q76EJ3 337 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZBED8Q8IZ13 594 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 C20orf203Q8NBC4 194 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR4A15Q8NGL6 344 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms