RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C12orf71A8MTZ7 269 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 TFP02787 698 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 NR4A1P22736 598 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 GGT2P36268 569 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 CAPGP40121 348 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 ART1P52961 327 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 PLP2Q04941 152 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 ZNF774Q6NX45 483 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 VHLLQ6RSH7 139 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 ZNF555Q8NEP9 628 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 OR51L1Q8NGJ5 315 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 OR9Q1Q8NGQ5 310 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 ADI1Q9BV57 179 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 HCAR1Q9BXC0 346 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 NMNAT2Q9BZQ4 307 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 CMC2Q9NRP2 79 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 CA10Q9NS85 328 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 BEX4Q9NWD9 120 aaPredicted RBP14.31□□□□□ -0.12
CXCL1-201ENST00000395761 PLCE1Q9P212 2302 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 DSCAMO60469 2012 aa14.31□□□□□ -0.12
CXCL1-201ENST00000395761 CREBBPQ92793 2442 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 LOC100509620A0A075B734 347 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 IQCMA0A1B0GVH7 501 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 RIIAD1A6NNX1 92 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 IFNGP01579 166 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 GYPBP06028 91 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 APOBEC3AP31941 199 aaPredicted RBP14.3□□□□□ -0.12
CXCL1-201ENST00000395761 THBS4P35443 961 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 PCBD1P61457 104 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 LSM6P62312 80 aaKnown RBP14.3□□□□□ -0.12
CXCL1-201ENST00000395761 NKX6-1P78426 367 aaPredicted RBP14.3□□□□□ -0.12
CXCL1-201ENST00000395761 TEKQ02763 1124 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 ZNF544Q6NX49 715 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 SYT9Q86SS6 491 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 NUP37Q8NFH4 326 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 SLC26A10Q8NG04 563 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 TMEM171Q8WVE6 324 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 TRUB1Q8WWH5 349 aaKnown RBP14.3□□□□□ -0.12
CXCL1-201ENST00000395761 ZNF184Q99676 751 aaPredicted RBP14.3□□□□□ -0.12
CXCL1-201ENST00000395761 FOXC2Q99958 501 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 TRAF4Q9BUZ4 470 aaPredicted RBP14.3□□□□□ -0.12
CXCL1-201ENST00000395761 PRRG3Q9BZD7 231 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 MED20Q9H944 212 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 ASH2LQ9UBL3 628 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 AKAP9Q99996 3911 aa14.3□□□□□ -0.12
CXCL1-201ENST00000395761 FAM183AA6NL82 134 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 SURF4O15260 269 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 GPRIN2O60269 458 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 CLUP10909 449 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 SPI1P17947 270 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 STOMP27105 288 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 SLC25A1P53007 311 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 GLO1Q04760 184 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 SNTB2Q13425 540 aaKnown RBP14.29□□□□□ -0.12
CXCL1-201ENST00000395761 IL18R1Q13478 541 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 TESK1Q15569 626 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 ADIPOQQ15848 244 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 MSMPQ1L6U9 139 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 MST1LQ2TV78 715 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 AGAP6Q5VW22 663 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 LYPD4Q6UWN0 246 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 USP51Q70EK9 711 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 DTX2Q86UW9 622 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 FBXL14Q8N1E6 418 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 MUC15Q8N387 334 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 PROKR2Q8NFJ6 384 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 OR2T4Q8NH00 348 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 CYGBQ8WWM9 190 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 PTP4A1Q93096 173 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 POM121L2Q96KW2 1035 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 FAIMQ9NVQ4 179 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 MRPL22Q9NWU5 206 aaKnown RBP14.29□□□□□ -0.12
CXCL1-201ENST00000395761 RAB26Q9ULW5 256 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 GMPPBQ9Y5P6 360 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 LHFPL6Q9Y693 200 aa14.29□□□□□ -0.12
CXCL1-201ENST00000395761 TVP23AA6NH52 213 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 OVOL3O00110 214 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 RER1O15258 196 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 SMPD2O60906 423 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 PTHP01270 115 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 HLA-DQA2P01906 255 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 OR4A8P0C604 315 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 ZNF3P17036 446 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CCNOP22674 350 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 APLNRP35414 380 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 SERPINF1P36955 418 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CDKN1AP38936 164 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CDC42P60953 191 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 GALK2Q01415 458 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 SCRN3Q0VDG4 424 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 AQP6Q13520 282 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 TBC1D28Q2M2D7 210 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CCDC92Q53HC0 331 aaPredicted RBP14.28□□□□□ -0.12
CXCL1-201ENST00000395761 C11orf71Q6IPW1 123 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CORO6Q6QEF8 472 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 OR1J2Q8NGS2 313 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 WACQ9BTA9 647 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CXXC4Q9H2H0 198 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 OR51B6Q9H340 312 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms